Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq311 102 2e-16 >seq311 Length=46126 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 297470 CCACCCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTT 297529 || |||||| | || ||||||||| || |||| ||| |||||||||| || Sbjct 39970 CCGCCCTGCGCGCGCGTACCGAACTGACCGCTCGGCCACAGAAAGTTGATGTTGTTCGAG 40029 Query 297530 CCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGA 297589 ||||| || | ||| || |||||||||||||| || || || ||||||| ||||| Sbjct 40030 CCGACGTAGTTCTGCGCCAGGTTCACGATGGTGCCGGAGAGCGAGACTTCGCCGTGGTGG 40089 Query 297590 TAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAA 297649 ||||| | ||| |||||||| ||||||| ||| || ||||| | ||| | | Sbjct 40090 TAGGCCGAGTTCTCGGCAACGTAGCCGCTGAGCTGCGCGACCTTGATCTCGTTAACGAGG 40149 Query 297650 TTGCGCTTGAA 297660 ||||||||||| Sbjct 40150 TTGCGCTTGAA 40160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102869910715900