Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 3e-15 >seq3 Length=187283 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| || || | || | || | ||| |||||||| || | ||||| ||| | Sbjct 12532 TCCACCGCGCAAACGAAGTACGAGGTGAAGCGTGGACTCTTTCTGGACGTTGTAGTCGGC 12473 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||||| ||||| ||||| || || | |||| | |||||||| || || || Sbjct 12472 AAGGGTGCGGCCGTCGTCGAGCTGCTTGCCCTGGAAGATGAGGCGCTGCTGGTCCGGGGG 12413 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| |||||||||| |||| ||||| | | ||||| Sbjct 12412 AATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGGTCTCGATCGTGTCGGAATGGTCGAC 12353 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||| | || || || || ||||||||||| Sbjct 12352 ATCAAGCGTAATAGTCTTGTTAGCGAGGGTCTTGACGAAAATCTGCAT 12305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475496556155360