Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq146 232 8e-56 >seq146 Length=62863 Score = 232 bits (256), Expect = 8e-56 Identities = 474/693 (68%), Gaps = 16/693 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || ||||| | ||| || || || ||||| | ||||| || || | ||| Sbjct 62799 TCGAAGTCCTCGCCACCGAGGTGGGTGTCACCGGCGGTGGACTTGACCTCGAACACACCG 62740 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | | || || || || || || ||||| ||||| || ||||| ||| Sbjct 62739 GAGTCGATGGAGAGGAGGGAGACGTCGAAGGTGCCGCCACCGAGGTCGAAGATGAGGACG 62680 Query 7577 TTCGTATCGTCGTCTTTGTT--CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 ||| ||| ||||| | ||| ||||| |||||||||||||| || || || || | Sbjct 62679 TTCTGCTCG--GTCTTGGAAGCCTTGTCGAGGCCGTACGCGATAGCGGCGGCGGTGGGCT 62622 Query 7635 CATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 | || || ||||| |||| || ||||| | ||| || | || || || || || || Sbjct 62621 CGTTGATGATACGCTGGACA-TTGAGGCCGGAAATGGTGCCGGCGTCCTTGGTAGCCTGA 62563 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || |||||||| |||||||| ||||| || ||||| |||| | |||| || || Sbjct 62562 CGCTGGGAATCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTTCTTGACGGGCTCGCCA 62503 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813 || || || || | | | ||||| ||||| || | ||| | || ||||| || | | Sbjct 62502 AGGAACTCCTCGGCAACACCCTTCATCTTGGTGAGGATCATGGCGGAGATCTCCTCGGGC 62443 Query 7814 GCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873 || | || | || ||||| ||||| || | ||| || | || || || Sbjct 62442 TTGAAGACCTGGGTCTGGCCCTTAAACTCAACCTCGACGGCGGGCTTCT-TGC--CATCG 62386 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCT-GTTGG-TCCGAAAACT 7931 | | ||||| | | ||| ||||| ||| |||| || |||| || |||| Sbjct 62385 CGAACGACCTTGAAGGGCCAGAGCTTCATGTCGCTCTGGATCTCCTTGGAGTCG--AACT 62328 Query 7932 TTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGT 7991 | ||||| | ||||| ||||| || | ||||| || ||||||||||| | |||| Sbjct 62327 CACGGCCGATCATGCGCTTAGCATCGAAGATAGTGTTCTTAGGGTTCATGGCAGCCTGGT 62268 Query 7992 TCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGG 8051 |||| || || || || | ||||| || | | || || || |||||||| || |||| Sbjct 62267 TCTTGGCAGCCTCACCAACGAGACGCTC---AGTCTCAGTGAAGGCGACGTAGGAAGGGG 62211 Query 8052 TCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGA 8111 | || || || || |||||||| || || ||||| ||||||| ||| || ||||||| Sbjct 62210 TGGTGCGGTTACCCTGGTCGTTGGCGATGATTTCAACGCGGTTGTTGCGCATCACGCCGA 62151 Query 8112 CGCACGAATACGTTGTTCCTAAATCAATACCGA 8144 ||||||| ||||| || || | || ||||||| Sbjct 62150 CGCACGAGTACGTGGTACCGAGGTCGATACCGA 62118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635127131439760