Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq30 500 8e-137 seq53 156 4e-33 seq168 118 1e-21 seq3 113 4e-20 seq182 104 2e-17 seq681 84.2 2e-11 >seq30 Length=128594 Score = 500 bits (554), Expect = 8e-137 Identities = 1248/1867 (67%), Gaps = 66/1867 (4%) Strand=Plus/Plus Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGAC 148010 ||||| || |||||||||||||||||||||||| | ||| ||||| ||||| ||| Sbjct 2423 GTGCGGAGGTAGTACATGCCCGTCTTGAGGCCCTTCTTCCACGCGTAAAAGTGCATCGAG 2482 Query 148011 GACA--TGAGCGT-GT--ACGTCGGG--TGCGGCACAAACAGATTAAACGACTGGCTCTG 148063 | || | |||| || |||| ||| || || | || |||||||| ||| Sbjct 2483 GTCAGCTTGGCGTAGTTGACGTTGGGCATGTGG-------ACGTTGAACGACTGCGACTG 2535 Query 148064 GTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCTCCCA 148123 ||| ||| ||||||| ||||| |||||||| | ||||| ||| |||||||||||| Sbjct 2536 GTCGATGTACGCGCCGCGGTCGGCGGCCATGTTGATGAGCGTCTTGCCCTTCATCTCCCA 2595 Query 148124 GGCCGTCTTGTACAGC-CGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGC 148182 |||||||||| | | ||| | | ||||| || || | | |||||| |||| Sbjct 2596 CACCGTCTTGTAGATCTCGCGCAAG-TCCTCGGGGATCTCGGTCAGCCCCTGCACAGAGC 2654 Query 148183 CGCGGTGCGCAAAAATCTGATT---GCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCA 148239 || || || | | || || | || | | || | | | | | ||| | Sbjct 2655 CGTTGTTGGCGATGAGCTTGTTCTTGAGCGTCTGGTTCCACAGTCCCTGGCG---GATGA 2711 Query 148240 GGTCATCGATCAGATACTGATTCAC-CACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA 148298 |||| | ||| | | || || ||| ||| ||||||||| ||| |||||||| Sbjct 2712 GGTCGCGCAGCAGGTGCGAGTTGACGCACACGAA-CTCGCCGGCCAGCGTGCGCCGCACG 2770 Query 148299 TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTT 148358 || | ||| ||| | | || ||||||||||||||||||| ||||||| || | Sbjct 2771 TAGAGGTTCGACGTGTAGGCCTCGAACGACTCGTTGTTGCCCAGGATCTGCGACGTGCTG 2830 Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGC 148418 |||||||||||| ||| || || ||||||||||||| ||| || || |||| Sbjct 2831 GCCGTGGGCATGGGCGCCACAAGAAGCGAGTTGCGCAGCCCGACGCGCTTGAT---GCGC 2887 Query 148419 TTC---AGAGCCGCCCAGTCCCAGAGC---------GGCGACGGTGTCACGTTCCACATG 148466 | | || || |||||||||||| || | || || |||| ||||||| Sbjct 2888 TCCTTGAGCGCGGCCCAGTCCCAGCGCCCGCCCACCGTCGCGGGCTCCACGCCCCACATG 2947 Query 148467 TCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGC 148526 ||| ||||||| |||||| || || |||| | | || ||||| |||| | Sbjct 2948 TCGAACTGCAGCTCGCCGCGCGAGGCCGGCGAGCCCGGGAAGGACTCGTACGCGCCGT-C 3006 Query 148527 GC-CGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTG 148585 || | | |||| ||||| |||| |||||| || |||| || ||| | || | Sbjct 3007 GCGCTCGGCCATGTCGCACGACGCCGTCAGCGCGGCGAAGTAGATGGTCGCAAAGATGTC 3066 Query 148586 CCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTC 148645 | ||| ||| | |||| |||| |||||||||| |||| | | | |||||| Sbjct 3067 GCGGTTCAGCGCCTGCGCCTCCTCGGACTCGTACGGCAGCCGCATAAGGATGAGCGCGTC 3126 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 ||| |||||||| || || | || ||||| ||||| |||||| |||||| Sbjct 3127 GGCCAGGCCCTGGACACCGAGCCCGATGGGGCGGTGGCGCATGTTGCTCGTGCGCGCCTC 3186 Query 148706 CTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGT 148765 || || ||| || ||||| |||||||| || || |||||| | || | || Sbjct 3187 CTTGACCGGGTACAGGTTGATGTCGATGACGCGGTTGAGGTTGCGCGTGGCGACTTGCGT 3246 Query 148766 AAT-TCT-----GCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCATCGGTTCAC 148819 | || |||| | || || | | | || || ||| | | ||||| | Sbjct 3247 CACCTCAAACAGGCGCTGGAAGTCGTAGGTGCCCGTGCGTTCGTCGACGAAGCGGTTGAG 3306 Query 148820 GGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTC 148879 ||||| ||||| || |||||||||||| ||| || || | ||||||| |||||||| Sbjct 3307 CGCGATCGAGGCGAGGTTGCACACGGCCACCTCGTCGGGCGACGTGTACTCGACGATCTC 3366 Query 148880 GGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCA 148939 | |||||| || ||| |||| ||||| ||||| || || ||||| |||||| Sbjct 3367 CGTGCACAGGTTCGAGCAGCGGATCGTGCCCAGGTTCTGCTGGTTCGACTTGCGGTTGCA 3426 Query 148940 CGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCG 148999 |||||||||||| || ||||| || ||| || ||| ||||| ||| | | | ||| Sbjct 3427 CGCGTCCTTGTAGAGGATGTAGGGCGTGCCCGTCTCCTGCTGCGCTTCGAGCACGG-CCG 3485 Query 149000 ATGCAGGTCCTGCGCGCGCACTTG-----CTGCTCGTAGCGACCCTCCTGCTCGTATAAA 149054 | || | |||||||| |||| |||| ||| |||| | |||||| Sbjct 3486 -TCCACAGC--GCGCGCGC-CTTGATCGTCTGCCGCGCGCGGCCCTGGTTCTCGTACTGC 3541 Query 149055 GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG 149114 || |||||||||||||| | |||| | | ||| | || || || || ||||||| Sbjct 3542 GTGTACAGCCGCTCGAAGTCGGCGCCCCACGAGTCGGCCAGCCCCGGCGCCTCGTGCGGG 3601 Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174 || | ||||||||| | ||| | | |||||||| ||| || || ||| ||||||| Sbjct 3602 CAAAAGAGCGACCAGAGCTCGTTCTTCTCCACGCGCTCCATGAAGAGGTCGCACACCCAG 3661 Query 149175 AGCGCGTACATGAGGTCGCGCGC-CTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTT 149233 || |||| | ||||||||||| | || || |||| ||| ||| |||||||| Sbjct 3662 AGGCCGTAGAAAAGGTCGCGCGCGCGCGCC-TCCTCGGAGCCGTGGTTCTTGCGCAGGTC 3720 Query 149234 GAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCG 149293 || | | | ||||| |||||||||||||| | ||| || |||| ||||||||||| Sbjct 3721 CAGGAAGGACATGATGTCGGCGTGCCACGGCTCCAGGTAGACGGCGAATGCGCCCTTGCG 3780 Query 149294 CTTGCCGCC---CTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTC 149350 ||| || ||||||||||| |||| || ||||||| ||||| || | ||| || | Sbjct 3781 GCGGCCTCCACCCTGGTCGACGTAGCGCGCCGTGTTGTTGAACACGCGCAGCATCGGGAC 3840 Query 149351 AATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTG 149410 | ||| | | |||||||| || || ||| |||| || || || | ||| Sbjct 3841 CAGGCCGTTCGAGGTGCCGTTGGTGCCGCGGATGTAGGAGCCGGTGGCGCGGACGTCGTG 3900 Query 149411 CACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCG 149469 || || ||| ||||||||| | | ||| ||||| |||||| ||| ||||| Sbjct 3901 AACCGCGAGGCCAATGCCGCCGGCCTGCTTCGAGATCATCGCGCACGTC-TTAAGCGTGT 3959 Query 149470 AGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCG 149529 ||||||||||||||| ||| ||||||||| | || |||||||| ||| |||| Sbjct 3960 CGTAGATGCCCTCGATCGAGTCCTCCTTCATGGTGACGAGGAAGCACGACGACAGCTGCG 4019 Query 149530 GAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCA 149589 | | | ||||||||| ||| | |||||| |||||| || || | ||||| || Sbjct 4020 GCATGCACGTGCCGGCGTTGAAGAGCGTGGGGGAGGCGTGGGTGAACCACTTCTGCGACA 4079 Query 149590 TCATCTCGTACGACTCGAGCAC-GCGGTCCATGTCATCGCCATGGATGCCTATGGCGACG 149648 | | ||||||| ||||| | | |||| ||| || | | |||||||| ||||||| Sbjct 4080 TGAGGTCGTACGTCTCGATCGCAGCGG-CCAGGTTGTTGAAGTGGATGCCGCAGGCGACG 4138 Query 149649 CGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCG 149708 ||||| ||||| ||||| || ||||| | | | | | ||||||| ||| | Sbjct 4139 CGCATGAGCATGTGCTGTGGGCGCTCGACGATCTGGCCGTGGAGCTTGAGCAGGTACGAG 4198 Query 149709 TTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCG 149768 || || |||||| |||| ||||| | |||| | ||||||||| || | | ||||| Sbjct 4199 CGCTCGAGCGTCTTGAAGCCGAAGTAGTCGTAGCCGAAGTCGCGGTTGTAGACGATGGCC 4258 Query 149769 GCGTCGA 149775 |||| || Sbjct 4259 GCGTTGA 4265 >seq53 Length=108086 Score = 156 bits (172), Expect = 4e-33 Identities = 184/249 (74%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 120633 GTAGTACAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCT 120692 |||| |||||| || ||||| ||||| ||||||||||||||||| || ||||||||| Sbjct 12989 GTAGAGCAGGCAGGCGAAGTCGGTGTGGAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGA 12930 Query 120693 AAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCC 120752 || || || |||||||| |||| | |||||| |||| |||||| ||| ||| Sbjct 12929 GAAGGTGAGTCCGGGCATCTTGCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCC 12870 Query 120753 CGAAAAGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGT 120812 || ||||| | |||||| ||| ||| ||| |||| | ||||||||| |||| ||| || Sbjct 12869 GGAGAAGAAGATGCCCTCGACGCAGGCGAAGCCGACGAGGCGCTCGGCGAACGACGCAGT 12810 Query 120813 CTTGCTGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTC 120872 | ||| ||||||||| | |||||| | ||||| |||| || | |||| ||| Sbjct 12809 GGGGTTGTTGATCCACTTGAGGGCCCAGGCCGCCTTGGTGCGGACCGAAGGCACGGTCTC 12750 Query 120873 GAACGCGTT 120881 || ||||| Sbjct 12749 GATGGCGTT 12741 >seq168 Length=58069 Score = 118 bits (130), Expect = 1e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || ||||||||||||||| | | ||||| ||||||||||| || |||||||| |||||| Sbjct 23 TCATCGAGCTGCTTGCCCTGGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTG 82 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | ||| | |||||||| | | || || |||| ||||| | Sbjct 83 TCCTGGATCTTCTGCTTCACGGTCTCGATCGTGTCGGAGTGGTCGACATCGAGGGTGATG 142 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||| || || || || ||||| |||||||| Sbjct 143 GTCTTGTTGGCGAGCGTCTTCACGAAGATCTGCAT 177 >seq3 Length=187283 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||||||||| | ||||| ||| | | ||| ||| ||||||||||||||| Sbjct 12501 GTGGACTCTTTCTGGACGTTGTAGTCGGCAAGGGTGCGGCCGTCGTCGAGCTGCTTGCCC 12442 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 | | ||||| ||||||||||| || || ||||| |||||||| |||||| |||||| Sbjct 12441 TGGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTG 12382 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | ||| | |||||||| | || || || | || | || ||| | || || Sbjct 12381 ACGGTCTCGATCGTGTCGGAATGGTCGACATCAAGCGTAATAGTCTTGTTAGCGAGGGTC 12322 Query 133644 TTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 12321 TTGACGAAAATCTGCAT 12305 >seq182 Length=55624 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || ||||||||||||||| | | ||||| ||||||||||| || |||||||| |||||| Sbjct 55602 TCATCGAGCTGCTTGCCCTGGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTG 55543 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||||| ||| | ||||| | | | || || || | |||| | Sbjct 55542 TCCTGGATCTTCTGCTTGACGGTCTCGATGGTGTCCGAGTGGTCGACATCAAGAGTGATG 55483 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||| | || || || |||||||||||||| Sbjct 55482 GTCTTGTTCGCGAGGGTCTTCACGAAAATCTGCAT 55448 >seq681 Length=11217 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || ||||||||||||||| | | || || ||||||||||| || || ||||| ||| | Sbjct 3160 TCATCGAGCTGCTTGCCCTGGAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCCTCCGCG 3101 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| | ||| | ||||| ||||||| | | || || | | ||||| Sbjct 3100 TCCTGGATCTTCTACTTAACAGTCTCAATGGTGTCGGAGTGATCAACAACAAGGGTGATC 3041 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCT 133656 || ||| || ||||| || |||||||||| Sbjct 3040 GTCTTGTTGGCAAGAGTCTTAACGAAAATCT 3010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483416485469360