Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq449 104 2e-17 >seq449 Length=32475 Score = 104 bits (114), Expect = 2e-17 Identities = 124/166 (75%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 5346 GATGAGCTGCGCCACGCGGTC-GCCTCGCCGCACCACGAAGGTCTCTTGGCCGAAGTTGA 5404 ||||||||||||||||||||| ||||| | ||| ||||| | | || || ||||| Sbjct 16826 GATGAGCTGCGCCACGCGGTCTCCCTCGGC-CACGGCGAAGTCAACGTCGCTGAGGTTGA 16884 Query 5405 AGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCCCACATCCA 5464 |||| | ||| || | ||| || ||| ||||| | || | ||||||||| || || || | Sbjct 16885 AGAGGATCACGCCGACGTTGCCGCGGTAGTCCTGATCGATGACGCCCGCGCCGACGTCGA 16944 Query 5465 CGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTA 5510 | ||| || ||| || ||||| | |||||||||||| ||||| Sbjct 16945 TGCTGTTCTTCCACGCCAGCCCGGAGCGCGGCGCCACGCGCCCGTA 16990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447807203285040