Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq449 114 1e-20 seq3 91.5 1e-13 >seq449 Length=32475 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 41178 GCGCTCGAGGATCAGCTGCGCGACACGATCACCCTTCATCACCACAAAGTCCACGTCGTT 41237 |||||| ||||| |||||||| || || || |||| ||| | ||||| |||||| | Sbjct 16817 GCGCTCCAGGATGAGCTGCGCCACGCGGTCTCCCTCGGCCACGGCGAAGTCAACGTCGCT 16876 Query 41238 GTTGTTCACCATCACTATGCCCACGTTGCCCGTGTAGTCGGGATCGATGACGCCAGCAGC 41297 | ||| | | | | ||| |||||||| |||||| ||||||||||||| || | Sbjct 16877 GAGGTTGAAGAGGATCACGCCGACGTTGCCGCGGTAGTCCTGATCGATGACGCCCGCGCC 16936 Query 41298 AATGTCGATCTTGTGCTTCAACGCCAGCCCCGATCGGGGCGCGATCCTACCGTAACAATC 41357 | |||||| ||| |||| |||||||||| || || ||||| | | ||||| | Sbjct 16937 GACGTCGATGCTGTTCTTCCACGCCAGCCCGGAGCGCGGCGCCACGCGCCCGTATACGCC 16996 Query 41358 TTTGGGCAGCTGCAGAGCAATGTCCGTCTTGATCAGCG 41395 ||||| ||| | || ||||| ||||||||||||| Sbjct 16997 CACGGGCATCTGGATCGCGATGTCGGTCTTGATCAGCG 17034 >seq3 Length=187283 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || | |||||| ||||| | ||| || ||||||| |||||||| ||| || Sbjct 12496 CTCTTTCTGGACGTTGTAGTCGGCAAGGGTGCGGCCGTCGTCGAGCTGCTTGCCCTGGAA 12437 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| |||| || |||||||||| |||||| ||||| | || Sbjct 12436 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGGT 12377 Query 35665 TGCCACCGTGTCG 35677 | | ||||||| Sbjct 12376 CTCGATCGTGTCG 12364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450789576667120