Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 4e-13 >seq3 Length=187283 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| |||||| || | || || |||||||| || || |||| || ||||| Sbjct 12507 TGAAGCGTGGACTCTTTCTGGACGTTGTAGTCGGCAAGGGTGCGGCCGTCGTCGAGCTGC 12448 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 |||||| || || || ||||||||||| | ||| | || ||| |||||| ||| ||| Sbjct 12447 TTGCCCTGGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTC 12388 Query 39202 TGTTTGAGCGTCGCCACCGTATCG 39225 || |||| ||| | | ||| ||| Sbjct 12387 TGCTTGACGGTCTCGATCGTGTCG 12364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429541862147882