Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq429 104 1e-17 >seq429 Length=23534 Score = 104 bits (114), Expect = 1e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1139 CTTCGCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTGACCTC 1198 || ||| || |||| |||||||| || | | | | || || |||||| | ||||| Sbjct 6278 CTGCGCCAGAACCCCGACTCGCGGCGCATCATCATGTCGGCGTGGAACCCGGCGGACCTG 6337 Query 1199 AGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGG 1258 || | ||||| || | ||||||||| | | | ||| | |||||| |||||| | Sbjct 6338 GGCAAGATGGCGCTGCCACCGTGCCACGTGCTCTCGCAGTTCTACGTCTCGGACGGCGAG 6397 Query 1259 CTCTCGCTGCAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATC 1318 |||||| | | |||||||||||||||| || ||| || || ||||| ||||| ||| Sbjct 6398 CTCTCGTGCCTGCTCTACCAGCGCAGCGCCGATATGGGGCTGGGCGTGCCCTTCAACATC 6457 Query 1319 GCCTCGTACGCGCTCCT 1335 || || |||||||| || Sbjct 6458 GCGTCCTACGCGCTGCT 6474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296128623103314