Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3 111 1e-19 >seq3 Length=187283 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||||||| ||| || |||| |||||| ||||| || ||| ||||||| Sbjct 12513 ACGAGGTGAAGCGTGGACTCTTTCTGGACGTTGTAGTCGGCAAGGGTGCGGCCGTCGTCG 12454 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || ||||| | |||||||| || | || | || ||||| ||| Sbjct 12453 AGCTGCTTGCCCTGGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 12394 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||||||||| | || | || ||||||| || || || | |||||| ||||| Sbjct 12393 ATCTTCTGCTTGACGGTCTCGATCGTGTCGGAATGGTCGACATCAAGCGTAATAGTCTTG 12334 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||||| ||||| || ||||| Sbjct 12333 TTAGCGAGGGTCTTGACGAAAATCTGCAT 12305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359987267408538