Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpingoeca_20rosetta_20[genbank_20GCA_5F000188695.1_202011-02-10] 154 sequences; 55,440,309 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 2e-14 >seq4 Length=2372320 Score = 95.1 bits (104), Expect = 2e-14 Identities = 278/426 (65%), Gaps = 2/426 (0%) Strand=Plus/Minus Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071 || || || || | ||| ||||| | || ||||||| ||| ||| || || |||||| Sbjct 2278588 CCGGGGCACTCGTGCGGGCACATGAGCGTCCACTCTTCGTTGGCCTCAACGCGCTTCATA 2278529 Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 || || || || | ||| || || | || | || | || | || ||||| || Sbjct 2278528 AACAGGTCGGGCACCCACAGCGCGAAGAAGAGGTCGCGGGCACGCTGCTCCTCAACACCG 2278469 Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191 || ||||| || || ||||| || | | || || |||||||| || | ||| | | Sbjct 2278468 GTGTTCTTCTTCAGCTCGAGAAAGTCAAAGATGTCTGCGTGCCACGGCTCGAGGTACACG 2278409 Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251 || | | || ||||| ||||| || ||||| || | ||| | || ||||| || | Sbjct 2278408 GCAAAGGCGCCGGGCCGCTTGTTGCCGCCCTGGTCGACGTAGCGCGCCGTGTTGTTGAAC 2278349 Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311 || | || ||| || | | || || || || ||||| |||| || || || Sbjct 2278348 ACGCGCAGCATGGGCACGAGCCCGTTCGAGTGGCCGTTGGTGCCGGCAATGTACGAGCCG 2278289 Query 66312 CTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 66371 || || || || || | || || || || || || | || ||||| | || Sbjct 2278288 CTGGCGCGGATGTTGTGCACGCTAAGGCCAATGCCGCCGGCTGTCTTGGAGATCATGGCA 2278229 Query 66372 CATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 66430 || ||| || | |||||| ||||||||||| || || || ||| ||||| | || || || Sbjct 2278228 CA-CGTCTTGAGCGTATCGTAGATGCCCTCGATGCTGTCGTCCTTCATGGTGAGGAGGAA 2278170 Query 66431 ACAGCT 66436 ||||| Sbjct 2278169 GCAGCT 2278164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171533017360