Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpingoeca_20rosetta_20[genbank_20GCA_5F000188695.1_202011-02-10] 154 sequences; 55,440,309 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq4 114 1e-20 >seq4 Length=2372320 Score = 114 bits (126), Expect = 1e-20 Identities = 139/187 (74%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 152719 CGACGGTAAATTGCTGGGAATTGGCCGCCGGAAGCGTACGAAAATAGTACATGCCCGTCT 152778 |||| ||||| || || |||| || | | ||| || | |||||||||||||||| Sbjct 2280440 CGACCGTAAACTGGATGGCGTTGGTGGCGGCACGCGAGCGCAGGTAGTACATGCCCGTCT 2280381 Query 152779 TGAGGCCACGTTGCCAGCCGTACATGTGCACCGACGCCATCTTAGCCAAAG-TAGGGTCG 152837 | ||||| || | ||| |||| | ||||| |||| | ||| ||||||| | |||||| Sbjct 2280380 TAAGGCCCCGCTTCCACGCGTAAAAGTGCATGGACGTGAGCTT-GCCAAAGTTGGGGTCG 2280322 Query 152838 GCCATGTACACGTTAAACGATTGACTTTGATCAATAAATGCGCCTCTATCTGCTGCCATG 152897 | |||| |||||| ||||| || || || || ||||| ||||| | ||| || |||||| Sbjct 2280321 GAGATGTGCACGTTGAACGACTGGCTCTGGTCGATAAAGGCGCCGCGATCAGCAGCCATG 2280262 Query 152898 TCGATCA 152904 || |||| Sbjct 2280261 TCAATCA 2280255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063045076800