Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpingoeca_20rosetta_20[genbank_20GCA_5F000188695.1_202011-02-10] 154 sequences; 55,440,309 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq10 87.8 2e-12 >seq10 Length=1852485 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 126180 GGTGTAAATGTAGCGGGGAGCTG-CCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACT 126238 |||| | ||||| || | ||||| ||| |||||||| ||| ||| ||||||||||||| Sbjct 1769354 GGTGAAGATGTAACGCG-AGCTGGCCGCGTCCTTGCCGCCCGCCAGGCGCGTGCCAAACT 1769296 Query 126239 GACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGA 126298 | || ||| || || | | |||||| ||||| || |||||| | | Sbjct 1769295 GGCCAATGGGCAGCAGCAGGTTGAGGTTGTTGCTGCCCACGAACCGCTGCGCCATGCCCA 1769236 Query 126299 CAATGGTCTCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGC 126358 ||||||| || |||| || ||||||||| | |||| | | ||||| | ||||| | Sbjct 1769235 CAATGGTGCCGGCCAGGCTCATCTCGCCGTGGTGGTAGGCCGAGTGCTCCGAGACGTACC 1769176 Query 126359 CGCTCAGCTGCGCAACCTTGAT 126380 || |||||||| |||||||| Sbjct 1769175 CGGCAAGCTGCGCCACCTTGAT 1769154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611390823070400