Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpingoeca_20rosetta_20[genbank_20GCA_5F000188695.1_202011-02-10] 154 sequences; 55,440,309 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq4 122 7e-23 >seq4 Length=2372320 Score = 122 bits (134), Expect = 7e-23 Identities = 275/410 (67%), Gaps = 5/410 (1%) Strand=Plus/Minus Query 129983 GCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTA 130042 |||| ||||| | ||||| | | | || || || || |||||||||| ||||| | Sbjct 2278575 GCGGGCACATGAGCGTCCACTCTTCGTTGGCCTCAACGCGCTTCATAAACAGGTCGGGCA 2278516 Query 130043 CCCACAGGGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCA 130102 ||||||| ||| | || | || || || ||||| |||| |||| |||| Sbjct 2278515 CCCACAGCGCGAAGAAGAGGTCGCGGGCACGCTGCTCCTCAACACCGGTGTTCTTCTTCA 2278456 Query 130103 GTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCT 130162 | || || || || | ||||| ||||||||||| || | || | || | ||||| Sbjct 2278455 GCTCGAGAAAGTCAAAGATGTCTGCGTGCCACGGCTCGAGGTACACGGCAAAGGCGCCGG 2278396 Query 130163 TCCG---TTTGCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTG 130219 ||| ||||| || ||||| |||| |||| | | |||||| | || |||| ||| | Sbjct 2278395 GCCGCTTGTTGCCGCCCTGGTCGACGTAGCGCGCCGTGTTGTTGAACACGCGCAGCATGG 2278336 Query 130220 CCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGT 130279 | | | ||||| | |||||| |||| ||||| | ||| | || || | || Sbjct 2278335 GCACGAGCCCGTTCGAGTGGCCGTTGGTGCCGGCAATGTACGAGCCGCTGGCGCGGATGT 2278276 Query 130280 TATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCA-ATCGCGTAGC 130338 | || ||||| || || ||||||||| | || || |||| || || || | ||| Sbjct 2278275 TGTGCACGCTAAGGCCAATGCCGCCGGCTGTCTTGGAGATCATGGCACACGTCTTG-AGC 2278217 Query 130339 GTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACA 130388 || || || ||||| |||| ||||| || || ||| | |||||||| || Sbjct 2278216 GTATCGTAGATGCCCTCGATGCTGTCGTCCTTCATGGTGAGGAGGAAGCA 2278167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727212223010