Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpingoeca_20rosetta_20[genbank_20GCA_5F000188695.1_202011-02-10] 154 sequences; 55,440,309 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq8 107 4e-18 >seq8 Length=1951132 Score = 107 bits (118), Expect = 4e-18 Identities = 287/434 (66%), Gaps = 6/434 (1%) Strand=Plus/Plus Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGT 243345 || ||||| ||||| ||||||||| | || || || || | || |||| Sbjct 1783543 TCCTTTGCGGAGCGCGTCGTCGCCTTTGCCGCTGTCGAGGGCATCTTCTTCAGCGGGTCG 1783602 Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405 ||| ||||||||| ||||| ||| || | ||||| ||||| | ||| ||| Sbjct 1783603 TTCGCCGCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACGCAGTCCAAC 1783662 Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAG 243465 ||| ||||||| |||||||||||||| ||| | || | || |||| || | | Sbjct 1783663 GAGCTCATCAGCCGCGACGAGGGCCTGCACTGCGACTTTGCCTGCCTCATGTTCTCCATG 1783722 Query 243466 CTCCAGAACAAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAAC 243525 || || || |||| || || |||| ||||||| || || || || | Sbjct 1783723 CTGCACAAGAAGCCGCCCAAGGAGCGCGTCATTGGCATCATCATGGACGCCGTCGAGATT 1783782 Query 243526 GAAAAGGAATTCATTTG--CGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAAC 243583 || |||| || |||| ||| || | || | || | ||||||||||| | Sbjct 1783783 GAGCAGGAGTT--TTTGACCGAGGCGCTGCCCGTCTCCCTCCTCGGCATGAACTCCACTC 1783840 Query 243584 TCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGA 243643 ||||| | ||||||| || || || |||||||| | || || || || || || | Sbjct 1783841 TCATGCGCGAGTACATTGAGTTTGTCTCCGACCGCCTCCTCGTCAGCCTCGGCTACGACA 1783900 Query 243644 AAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGG-AAA 243702 | || |||||| ||| |||||||| ||||||||||| |||||| | || |||| || Sbjct 1783901 AGGTCTACAACGCCACCAACCCCTTCCCCTTTATGGAGAACATTTC-CATCGAGGGCAAG 1783959 Query 243703 ACTAACTTCTTCGA 243716 || |||||||| || Sbjct 1783960 ACCAACTTCTTTGA 1783973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877823879900