Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpingoeca_20rosetta_20[genbank_20GCA_5F000188695.1_202011-02-10] 154 sequences; 55,440,309 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq22 89.7 2e-12 >seq22 Length=1285527 Score = 89.7 bits (98), Expect = 2e-12 Identities = 173/250 (69%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || || || || ||||| ||||| | || || ||||| || || ||||| | ||| Sbjct 842061 GTCTTCACGGCCGTGTCAATCAGACCCTCGCGCCCGCCCATGGCGTGAAAGAAAAACTCG 842120 Query 302680 TCCGG-TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCT-CGGGCGAAT 302737 | ||| ||| ||||| || ||||||| || || || | ||| | ||||| | Sbjct 842121 TGCGGCTCG-AGCCCTTGGATGTAGGAGCTGAAGACAAACCCGCACGCGTGCGGGCCG-T 842178 Query 302738 CGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTC 302797 |||| |||| |||||| |||||| | | || | | |||| | ||||| ||||| | Sbjct 842179 AGTCGTCCTTGACAAAGTGCGGCAGGCTGCGGTGCCGAAAGCCAAAGGGGATGCGCTTGC 842238 Query 302798 CATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCT 302857 | || ||||||||||| | ||| | || ||||| || || || | || ||||||| Sbjct 842239 CCTCCACGTTCTGCTGCGAGACGCAGGCGATGATCTGGGAGATGTTGATCTCGCTGCCCT 842298 Query 302858 TGGAGCCAGC 302867 |||| || || Sbjct 842299 TGGACCCGGC 842308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814695919898