Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpingoeca_20rosetta_20[genbank_20GCA_5F000188695.1_202011-02-10] 154 sequences; 55,440,309 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 4e-14 >seq4 Length=2372320 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 150413 TAGTACATGCCGGTTTTGAGGCCGCGCTTCCAACCGTACATGTGCACCGACGCCATTTTA 150472 ||||||||||| || || ||||| |||||||| |||| | ||||| |||| | || Sbjct 2280396 TAGTACATGCCCGTCTTAAGGCCCCGCTTCCACGCGTAAAAGTGCATGGACGTGAGCTT- 2280338 Query 150473 GGCAAAGTAGGGTTTGCC-ATGTACACGTTGAACGATTGACTTTGATCGATAAATGCTCC 150531 | |||||| ||| | | |||| |||||||||||| || || || |||||||| || || Sbjct 2280337 GCCAAAGTTGGGGTCGGAGATGTGCACGTTGAACGACTGGCTCTGGTCGATAAAGGCGCC 2280278 Query 150532 CCTGTCTGCTGCCATTTCAATCA 150554 | || || ||||| ||||||| Sbjct 2280277 GCGATCAGCAGCCATGTCAATCA 2280255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543059552800