Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpingoeca_20rosetta_20[genbank_20GCA_5F000188695.1_202011-02-10] 154 sequences; 55,440,309 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq8 91.5 2e-13 >seq8 Length=1951132 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 ||||| | |||||| ||||| || || |||||||| || | || || | ||||| || Sbjct 1783715 AACATGAGGCAGGCAAAGTCGCAGTGCAGGCCCTCGTCGCGGCTGATGAGCTCGTTGGAC 1783656 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || || ||||| || || ||||| |||||||| || ||||| || || || || Sbjct 1783655 TGCGTCAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGCGGCGAACGACCCG 1783596 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAAC 39762 ||||||||||| || || || ||||| || || Sbjct 1783595 CTGAAGAAGATGCCCTCGACAGCGGCAAAGGCGAC 1783561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907477700560