Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salpingoeca_20rosetta_20[genbank_20GCA_5F000188695.1_202011-02-10] 154 sequences; 55,440,309 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq10 104 5e-17 >seq10 Length=1852485 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| ||||| || ||| || ||||||||||| ||| | || | || || Sbjct 1590804 AGCACAAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCC 1590863 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| |||||||||| ||||||||| | || ||| || ||||| || Sbjct 1590864 TCAAGCTGCTTGCCGGCAAAGATAAGCCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 1590923 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| |||| | ||| || ||| || ||||| || || || Sbjct 1590924 TGGATCTTCGCCTTGACGTTCTCAATCGAGTCAGATGGCTCAACCTCAAGCGTGATGGTC 1590983 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || |||||||| |||| |||||| Sbjct 1590984 TTGCCAGTCAGCGTCTTCACAAAGATCTGCAT 1591015 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| ||||| || ||| || ||||||||||| ||| | || | || || Sbjct 1590348 AGCACAAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCC 1590407 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| |||| ||||||||| | || ||| || ||||| || Sbjct 1590408 TCAAGCTGCTTGCCAGCAAAGATGAGCCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 1590467 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| |||| | ||| || ||| || ||||| || || || Sbjct 1590468 TGGATCTTCGCCTTGACGTTCTCAATCGAGTCAGATGGCTCAACCTCAAGTGTGATGGTC 1590527 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || |||||||| |||| |||||| Sbjct 1590528 TTGCCAGTCAGCGTCTTCACAAAGATCTGCAT 1590559 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| ||||| || ||| || ||||||||||| ||| | || | || || Sbjct 1590576 AGCACAAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCC 1590635 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| |||| ||||||||| | || ||| || ||||| || Sbjct 1590636 TCAAGCTGCTTGCCAGCAAAGATGAGCCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 1590695 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| |||| | ||| || ||| || ||||| || || || Sbjct 1590696 TGGATCTTCGCCTTGACGTTCTCAATCGAGTCAGATGGCTCAACCTCAAGTGTGATGGTC 1590755 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || |||||||| |||| |||||| Sbjct 1590756 TTGCCAGTCAGCGTCTTCACAAAGATCTGCAT 1590787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818523367334