Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq37552 100 2e-16 >seq37552 Length=3269 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| || || | || || || || || ||| | |||||||||||||| Sbjct 3246 ATGCAGATCTTTGTCAAGACTCTCACTGGAAAGACAATCACCTTGGATGTCGAATCGAGT 3187 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | || | ||| |||| || ||| | || || ||| | || ||| ||| Sbjct 3186 GATACCATCGATAATGTGAAGGCTAAGATTCAGGATAAGGAGGGCATCCCCCCTGATCAG 3127 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||||| || | || || || |||||||||||| || || |||||||| | Sbjct 3126 CAGCGTTTGATCTTCGCTGGAAAGCAACTGGAAGATGGACGTACCCTGGCCGATTACAAC 3067 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || ||||| ||| | || ||||| | ||||| || | ||||||||| Sbjct 3066 ATTCAGAAGGAGTCTACTCTTCACCTTGTGTTGCGTCTCCGCGGAGGT 3019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418077211911200