Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq44045 228 2e-54 >seq44045 Length=9771 Score = 228 bits (252), Expect = 2e-54 Identities = 783/1200 (65%), Gaps = 47/1200 (4%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | || || | |||| ||||||||| ||| | | || | ||| ||| Sbjct 1391 TTCGGGTTCAAAACATTAGAGAGATCCTACCTGCTGCGTCTGGACGGAAAAGTTGCTGAG 1450 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || || ||||| ||| | |||||||| | | ||||||||| || || | |||| Sbjct 1451 CGACCTCAGCACATGCTTATGCGTGTGAGTGTGGGTATCCATGGCGACGACATCGATGGG 1510 Query 363511 GCGATTGAAACATATAAGCTTCTA----AGTGCTCGTGTATTCACGCACGCCACGCCAAC 363566 || ||||||||||| || ||| || | | || || | ||||| | || || Sbjct 1511 GCTATTGAAACATACAACAACCTATCACAGGGTTGGTTTA----CACACGCTTCACCTAC 1566 Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626 ||| ||| || || || | ||| ||| | || || || || ||||| | ||| | Sbjct 1567 CCTGTTCAACGCCGGCACAAGACGTCCCCAGCTATCATCGTGTTTCCTTCTCACAATCGA 1626 Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686 |||||| ||||| || ||||||| |||| || |||| || || | || ||||||| Sbjct 1627 GGACGACTCCATTGAAGGTATCTACAACACCCTGAAGACCTGCGCGATGATCTCCAAGAG 1686 Query 363687 TGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCG-TGCACAGAACAGTTACATTCGC 363744 ||| || || || || | | || || |||| | | | || |||| || ||||| ||| Sbjct 1687 TGCCGGAGGTATCGGACTCAACGTTC-ACAAGATCAGATCCAAAGAA-AGCTACAT-CGC 1743 Query 363745 -GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 || || ||| |||| || || || || || ||||| ||||| || |||| || || Sbjct 1744 TGGAACCAATGGAAACTCTAACGGACTTGTGCCTATGCTGCGTGTATTCAACAACACCGC 1803 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | ||||| ||||| ||||| ||||| || || ||||| ||||| || ||||| Sbjct 1804 ACGCTACGTTGACCAAGGTGGTAACAAGCGTCCTGGAGCATTTGCAATGTACCTAGAGCC 1863 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 || || ||||| |||||||| || || || ||| ||||| || |||||| | Sbjct 1864 CTGGCACGCAGATATCTTTGAGTTCCTGGATCTAAAGAAGAACACAGGTTCAGAGGAGAT 1923 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG-G 363982 ||| ||||||||||| |||| | || ||| | || | |||||| | || ||| | Sbjct 1924 GCGCGCACGTGATCTTTTCTTCGGCCTGTGGATCAACGATCTATTTATGGAACG-GTGCG 1982 Query 363983 AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042 | || | | ||| || || | ||| || ||||| | |||||| | Sbjct 1983 AAGCCGACGGAGAGTGGAGTCTGTTCTCACCAAGTGATGCACCAGGCTTGGACGATGTCT 2042 Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT-CGTAAG 364101 |||| | || | || | ||||||| | ||||| || ||||| | ||| | || Sbjct 2043 GGGGAAAGGAGTTTGAAGATCTATACCACAAGTACGAGCGCGAGGGTAGAGCTAAGCGAG 2102 Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161 ||| |||||| |||| ||||| ||||| | || |||||| ||||| || ||| Sbjct 2103 -TAATCAAGGCACAGCAGCTGTGGTTCGCCATTCTAGAGGCGCAGACCGAGACCGGCACA 2161 Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221 || || ||| ||||||| ||| |||||||||||||| ||||||||| | | || || Sbjct 2162 CCATACATGCTGTACAAGGATGCGTGCAACCGCAAGAGTAACCAGCAGAATTTGGGCACC 2221 Query 364222 ATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACT 364278 | ||| || || || || || ||||| | || ||| | | |||||||| Sbjct 2222 A-TCA--AGTGCTCTAATCTGTGCTGTGAGATCGTCGAGTACTCTTCCCCCGACGAAGTG 2278 Query 364279 GCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA---AGATGGTACTTTT 364335 || || ||||| |||||||| | || || || || || || || || | Sbjct 2279 GCTGTGTGTAATCTTGCGTCCCTGGCCCTGCCTAAGTACGTCAAGACCGACGGAGCAAAC 2338 Query 364336 GACCACCAG--CATCTTT----------ATGACGTAACCTATCAT-GCTACTTGCAATCT 364382 | || | || | |||| | || || ||| | || || || ||||||| Sbjct 2339 GGCCCCGAGTTCGACTTTGTGAAGCTCGAGGAGGTCACC-AGAATAGCCACGCGCAATCT 2397 Query 364383 CGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCG 364442 |||| | |||||| || ||||| || | |||||||| ||| ||| | ||| Sbjct 2398 AAACAAAATCATCGACGTCAACTATTACCCTGTGCCTGAAGCTGAGAAGAGTAACAAGCG 2457 Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTA---TGATGCTCAA 364499 || || || || ||||| |||||||| ||||| || |||| || | |||||| | Sbjct 2458 CCACCGACCTATCGGTCTAGGTGTACAAGGCCTTGCAGACGCGTTCATCTTGATGCGC-- 2515 Query 364500 GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559 || |||| ||| || || || || || || || ||| | ||||| || || || || Sbjct 2516 -CTGCCATTCGATAGCCCCGATGCACGCGTGCTGAACAAGCACATCTTCGAGACTATCTA 2574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302610735287270