Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11]
44,485 sequences; 85,494,527 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq27769 102 7e-17
>seq27769
Length=1647
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341
||| |||||||||||||| || || || || ||||| || || ||| |||| ||||||
Sbjct 1009 AAACATGCAAATTTTTGTGAAGACACTAACTGGAAAGACTATCACCCTCGATGTGGAGTC 950
Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
||| || || ||| | || || || || || || ||||| ||||| ||
Sbjct 949 CAGTGATACGATTGATAATGTGAAGGCCAAGATACAAGACAAGGAAGGAATCCCCCCCGA 890
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|||||| |||| || | ||| || ||||| | ||||||| | || | || || ||
Sbjct 889 TCAGCAGCGACTGATCTTTGCTGGTAAACAGCTTGAAGATGGCCGCACACTTGCTGACTA 830
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||| || || |||||||| ||| | ||| | || || | |||||||| ||
Sbjct 829 TAATATACAGAAAGAGTCAACTCTTCATCTCGTTTTACGTTTGCGAGGTGG 779
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || || ||||| |||||||| || || || || || | || ||||| ||
Sbjct 777 ATGCAGATATTCGTCAAGACGCTCACTGGTAAGACTATCACGTTGGATGTCGAGTCTAGT 718
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|| ||| | | | || ||| ||||| ||||| |||||| | || ||||||
Sbjct 717 GATACTATAGATAATGTGAAAGTTAAAATACAAGATAAGGAAGGCATACCACCAGATCAG 658
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| |||| || | || || ||||||||||| || | | || |||| |||||||||
Sbjct 657 CAGCGACTAATCTTCGCAGGTAAACAATTAGAGGACGGCCGTACTTTGGCTGATTATAAC 598
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGA 115513
|| ||||| ||||| ||| | || | || |||||||| |||| |||
Sbjct 597 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTAAGAGGCGGA 550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425113395098200
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |