Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq44439 125 9e-24 >seq44439 Length=16216 Score = 125 bits (138), Expect = 9e-24 Identities = 246/359 (69%), Gaps = 20/359 (6%) Strand=Plus/Plus Query 126038 AGCCGGTCCCAATGCCGACCGACCCGTTGACCAGCACCAGCGGAATGATGGGCACAAAGT 126097 ||||||| || ||||||| | |||||||| ||||||| || |||||||||||||||| Sbjct 772 AGCCGGTGCCGATGCCGATGGCGCCGTTGACAAGCACCATGGGGATGATGGGCACAAAGT 831 Query 126098 GGACCGGCTCA---------CCCTCC--GAGCTCTGCTCCAAG-ATGGGGTCGTCCTCCT 126145 | | |||||| |||||| || || | || | || ||||||||| Sbjct 832 GCAGTGGCTCAATGGGCTTGCCCTCCTCGACCTGGGGGGTGAGCACGGCGTCGTCCTCGA 891 Query 126146 CGCGGAAAATGTAGGGTAGAATCTTGTGCG---GTTTGGTGTAAATGTAGCGGGGAGCTG 126202 | | ||| ||| | || | ||| | |||||| ||||| | ||| ||| Sbjct 892 CCCTGAAGATGGCCCTTG---TCCAGGGCGCGAGGCGGGTGTAGATGTACCTGGG-GCTC 947 Query 126203 CCGAA-TCCTTGCCTCCCTCCAACCGCGTGCCAAACTGACCGTCCGGCTCCAACAACTGC 126261 || | |||||||| ||||| | || |||| ||||| ||| |||| ||| || || Sbjct 948 GCGCAGTCCTTGCCGCCCTCGAGGCGGCTGCCGAACTGCCCGGACGGCACCAGCAGCTCG 1007 Query 126262 ACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGACAATGGTCTCGCACAGGTTCTGC 126321 | ||||||| |||||| ||| ||| || | |||||||| | ||||| || | Sbjct 1008 AGGTTGTTGGTGCCCACATAGTTCTGGGCCATGCACACAATGGTGGAGAACAGGCTCGCC 1067 Query 126322 TCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCGCTCAGCTGCGCAACCTTGAT 126380 || ||||||| |||| ||||||||||||| ||| | ||| | ||| || |||||||| Sbjct 1068 TCACCGTGCTGGTAGGCGGTCTGCTCGGCGACGCTGGCGCCGAACTGGGCTACCTTGAT 1126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611052027836000