Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq44045 246 4e-60 seq39701 221 2e-52 >seq44045 Length=9771 Score = 246 bits (272), Expect = 4e-60 Identities = 957/1483 (65%), Gaps = 41/1483 (3%) Strand=Plus/Minus Query 62432 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62491 || || ||||| || || ||| ||| || | || |||| || | |||| ||| Sbjct 2634 TAGGTCTCGTAAGGACCCTCCCTCTTGGCAATCGCAATACTCTCCGTCACCGCACTGTAG 2575 Query 62492 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAA 62551 || || || |||||||| | ||| || || | | || || ||||||| ||||| Sbjct 2574 TAGATAGTCTCGAAGATGTGCTTGTTCAGCACGCGTGCATCGGGGCTATCGAATGGCAGG 2515 Query 62552 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62611 | | || ||||||||||| | ||||| ||||| | ||||||||||| || | | Sbjct 2514 CGCATCAAGATGAACGCGTCTGCAAGGCCTTGTACACCTAGACCGATAGGTCGGTGGCGC 2455 Query 62612 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62671 || ||| | |||||||| || | ||| ||||| || | || || ||||| || ||| Sbjct 2454 TTGTTACTCTTCTCAGCTTCAGGCACAGGGTAATAGTTGACGTCGATGATTTTGTTTAGA 2395 Query 62672 TTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---------- 62718 || | || | ||| ||||| |||| || || | ||| || || Sbjct 2394 TTGCGCGTGGCTATTCTGGTGACC---TCCTCGAGCTTCACAAAGTCGAACTCGGGGCCG 2338 Query 62719 -TCGC-CCATC--TATT-ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCT 62773 | || || || | || || || | || || | || || |||||||| || || Sbjct 2337 TTTGCTCCGTCGGTCTTGACGTACTTAGGCAGGGCCAGGGACGCAAGATTACACACAGCC 2278 Query 62774 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTT 62833 || || | | | || | | |||||| ||| |||||| ||||||||||| Sbjct 2277 ACTTCGTCGGGGGAAGAGTACTCGACGATCTCACAGCACAGATTAGAGCACTTGATGGTG 2218 Query 62834 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA 62893 || ||||| || || |||||||| ||| ||||||||||| || || ||| |||| || Sbjct 2217 CCCAAATTCTGCTGGTTACTCTTGCGGTTGCACGCATCCTTGTACAGCATGTATGGTGTG 2158 Query 62894 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTA-TAG 62951 || || || |||| | |||| ||| || ||| | | || | ||||| |||| | | Sbjct 2157 CCGGTCTCGGTCTGCGCCTCTAGAATGGCGAACCACAGCTGCT-GTGCCTTGATTACTCG 2099 Query 62952 ATTTGTATCTCTTTTCTCTTTCGTA-TAGT-GTATACAATCGTTCGAACTCGTCTCCCCA 63009 || | ||| || | ||||| | || ||||| ||| ||| ||||| | |||||| Sbjct 2098 CTTAG-CTCTACCCTCGCGCTCGTACTTGTGGTATA-GATC-TTCAAACTCCTTTCCCCA 2042 Query 63010 AACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTT 63069 |||| ||||| || || ||| || | | || |||||||||||| ||| Sbjct 2041 GACATCGTCCAAGCCTGGTGCATCACTTGGTGAGAACAGACTCCACTCTCCGTC-GGCTT 1983 Query 63070 CAC-TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTAT 63128 | | |||| |||||| ||||| ||||| || | | || ||||| | | | Sbjct 1982 CGCACCGTTCCATAAATAGATCGTTGATCCACAGGCCGAAGAAAAGATCACGTGCGCGCA 1923 Query 63129 GTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACG 63188 ||||| ||||| ||||| || ||||| |||||| | | ||||| | ||||| | Sbjct 1922 TCTCCTCTGAACCTGTGTTCTTCTTTAGATCCAGGAACTCAAAGATATCTGCGTGCCAGG 1863 Query 63189 GTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 63248 | || | ||| || || | ||||||| || ||||| || || || || | ||| | | Sbjct 1862 GCTCTAGGTACATTGCAAATGCTCCAGGACGCTTGTTACCACCTTGGTCAACGTAGCGTG 1803 Query 63249 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTG 63308 ||||||| || | || | || ||| || | || || || || | |||||||| || | Sbjct 1802 CGGTGTTGTTGAATACACGCAGCATAGGCACAAGTCCGTTAGAGTTTCCATTGGTTCCAG 1743 Query 63309 AGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCAT 63366 ||| |||||| | ||| | || || || ||| || || || || || || | Sbjct 1742 CGATGTAGCTTTCTTTGGATCTGATCTTGTGAACGTTG--AGTCCGATACCTCCGGCACT 1685 Query 63367 TTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCAT 63426 || ||||| | ||||| || | || | ||||| || || || || ||| Sbjct 1684 CTTGGAGATCATCGCGCAGGTCTTCAGGGTGTTGTAGATACCTTCAATGGAGTCGTCCTC 1625 Query 63427 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 63486 || | || || ||||| || | ||| |||| || || || || || || | ||| Sbjct 1624 GATTGTGAGAAGGAAACACGATGATAGCTGGGGACGTCTTGTGCCGGCGTTGAACAGGGT 1565 Query 63487 AGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTC 63546 ||| |||||||| |||||||| | || || ||||| || |||||||| || Sbjct 1564 AGGTGAAGCGTGTGTAAACCAACCCTGTGATAGGTTGTTGTATGTTTCAATAGCCCCATC 1505 Query 63547 TATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 63606 || || ||| || || || |||||||| | |||||||||||||| ||| | Sbjct 1504 GATGTCGTCGCCATGGATACCCACACTCACACGCATAAGCATGTGCTGAGGTCGCTCAGC 1445 Query 63607 GATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 63666 | || || | || || ||||||| | || || ||||| || || || || | Sbjct 1444 AACTTTTCCGTCCAGACGCAGCAGGTAGGATCTCTCTAATGTTTTGAACCCGAAGTACTG 1385 Query 63667 GTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC 63726 ||| |||||| || ||||||| ||| ||||||||||||| || | | ||| Sbjct 1384 GTAGTTAAAGTCACGATCGTAAACAATCGCCGAGTTGAGTTT---CTCAGAGTTGGCTCG 1328 Query 63727 TACATCCATG--GTAATACT-TGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGAC 63783 ||| | | | | | || || | | |||| ||||| | || || || || || Sbjct 1327 CACACGCTGGATGAACTCCTCGGAGACCAGAGGACTCTGTTTGTCGTTCTTGGGGTTAAC 1268 Query 63784 ATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT 63843 ||| | ||||| | ||| || ||||| || | || |||||||| ||||| ||||| Sbjct 1267 GTAGGTAGCCAAATCATTCATAACCTCACTGAACACCTTCTTTGTTTCCTTGTGCAGATT 1208 Query 63844 TGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGT 63886 || | || || | || || || || || || || || ||| Sbjct 1207 GGACATCGCAATGCGGGCAGCCAGGATAGCGTAGTCGGGGTGT 1165 >seq39701 Length=4095 Score = 221 bits (244), Expect = 2e-52 Identities = 400/580 (69%), Gaps = 5/580 (1%) Strand=Plus/Minus Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 || ||| || || || ||||| || ||||| ||||| || || || || ||||| || || Sbjct 2777 CAGACAAGCAAAGTCACAGTGGAGTCCCTCATCTCTGCTGATCAACTCATTGGAGAAAGT 2718 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 ||||| |||||||| |||||||| || | |||||| || || ||||| || ||||| || Sbjct 2717 TAGTCCAGGCATTAGCCCACGCTTCTTCATCCAAAAGATCGAGGCAAAGGAGCCAGAGAA 2658 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT- 32835 || || || |||||||| || ||||| | | | ||| || ||| || | || | Sbjct 2657 AAAGATACCCTCTACTGCAGCGAAGGCTACCACACGCTCACCGAAACTGGAGGCATCGTC 2598 Query 32836 GT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 32893 || |||||||| | ||||| |||||||| || || || ||| | |||||| ||||| Sbjct 2597 GTTGATCCACTTGAGGGCCCAGTCGGCCTTTTTCTTGACGGCAGGGAGTGTCTCAATAGC 2538 Query 32894 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA-T 32952 ||||| || | | || ||| || | ||||| || || || | | | Sbjct 2537 GTTAAATAGGTTATCCTTCTCACGGGGGTCACGGATGTATGTCTCGAT-AAGCGTGGAGT 2479 Query 32953 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGG 33012 |||| || || || ||||| |||||||| || || |||||||||||||| | ||||||| Sbjct 2478 ACATCTCAGAGTGGATGTTCTCAATGGCGATCTGGAATCCGTAGAAGCAACGTGCCTCGG 2419 Query 33013 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 33072 || |||||||| | || || || | ||| || ||||| || || ||||||| Sbjct 2418 CGATTTGTACTTCACCGCTGAAGCGCTCGAGGAGATTCTCGTTCACAATACCATCACTGG 2359 Query 33073 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCC 33132 | || || || ||||| ||||| || || | ||| | | || || | || Sbjct 2358 CAGCGAAGAAAGCCAACACATGGGATAAGAAGTGGCGCTCGCCATCCTTAAGGTTCTCCC 2299 Query 33133 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 | ||| | ||| ||| | ||| || || || || ||||| || || ||||| |||| Sbjct 2298 AGTCAGCTAGATCACGAGACAGATCAACCTCCTCAACAGTCCAGAAAGAAGCCTCCGCCT 2239 Query 33193 TTTTATACATATTCCAGATGTCATGATATTGAATTGGAAA 33232 | || ||||| | |||||| || || ||||| || || || Sbjct 2238 TCTTGTACATCTGCCAGATCTCCTGGTATTGGATAGGGAA 2199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633279661006000