Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq39701 264 1e-65 >seq39701 Length=4095 Score = 264 bits (292), Expect = 1e-65 Identities = 429/615 (70%), Gaps = 2/615 (0%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGAT-ATCAACTCATTGCTGAATGTTAA 93150 || |||||||| || | || || |||| || | |||||||||||| ||| |||| Sbjct 2773 CAAGCAAAGTCACAGTGGAGTCCCTCATCTC-TGCTGATCAACTCATTGGAGAAAGTTAG 2715 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || || || ||||| | |||||| || || ||||| ||||| ||||| Sbjct 2714 TCCAGGCATTAGCCCACGCTTCTTCATCCAAAAGATCGAGGCAAAGGAGCCAGAGAAAAA 2655 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||||| || || || || || || || | ||| || | ||| | | || || | | Sbjct 2654 GATACCCTCTACTGCAGCGAAGGCTACCACACGCTCACCGAAACTGGAGGCATCGTCGTT 2595 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 |||||| || | ||||| ||||| |||||||| | ||| ||||| || |||||||| Sbjct 2594 GATCCACTTGAGGGCCCAGTCGGCCTTTTTCTTGACGGCAGGGAGTGTCTCAATAGCGTT 2535 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 |||||||| ||| ||| | || || |||||||| ||||| | | || ||||| Sbjct 2534 AAATAGGTTATCCTTCTCACGGGGGTCACGGATGTATGTCTCGATAAGCGTGGAGTACAT 2475 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 ||||| |||| ||||| || || || |||||||||||||| || | || || | ||| Sbjct 2474 CTCAGAGTGGATGTTCTCAATGGCGATCTGGAATCCGTAGAAGCAACGTGCCTCGGCGAT 2415 Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 || ||||| || | ||| | |||||| || || || |||||||| || || Sbjct 2414 TTGTACTTCACCGCTGAAGCGCTCGAGGAGATTCTCGTTCACAATACCATCACTGGCAGC 2355 Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570 || |||||||| | ||| || || || ||| |||| ||||| || ||||| || Sbjct 2354 GAAGAAAGCCAACACATGGGATAAGAAGTGGCGCTCGCCATCCTTAAGGTTCTCCCAGTC 2295 Query 93571 GGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTT 93630 | |||||| || ||||| || || || |||||||| || || || || || || || Sbjct 2294 AGCTAGATCACGAGACAGATCAACCTCCTCAACAGTCCAGAAAGAAGCCTCCGCCTTCTT 2235 Query 93631 GTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATC 93690 |||||| | ||| || || || ||||| || || |||| || || ||| |||||| || Sbjct 2234 GTACATCTGCCAGATCTCCTGGTATTGGATAGGGAATAGCACGAAGCGACGAGGGTTTTC 2175 Query 93691 TTTTAGTAACGGCTC 93705 | | || | ||||| Sbjct 2174 TCTGAGGAGGGGCTC 2160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556551150591400