Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq27769 120 3e-22 >seq27769 Length=1647 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || ||||| | | || ||||||| || || ||||| || || || || || || Sbjct 778 ACCACCTCGCAAACGTAAAACGAGATGAAGAGTTGACTCTTTCTGTATATTATAGTCAGC 837 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||||||||| || || ||| | || || |||||||| ||||| || Sbjct 838 AAGTGTGCGGCCATCTTCAAGCTGTTTACCAGCAAAGATCAGTCGCTGCTGATCGGGGGG 897 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||||| || |||||||| || ||| ||| || | ||||||| || ||||| Sbjct 898 GATTCCTTCCTTGTCTTGTATCTTGGCCTTCACATTATCAATCGTATCACTGGACTCCAC 957 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | ||||| || || | || || || ||||||||||| || Sbjct 958 ATCGAGGGTGATAGTCTTTCCAGTTAGTGTCTTCACAAAAATTTGCATGTT 1008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499366966263400