Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq44045 125 7e-24 >seq44045 Length=9771 Score = 125 bits (138), Expect = 7e-24 Identities = 471/735 (64%), Gaps = 8/735 (1%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || |||||||||||||| || || || ||| | || ||||||||||| | || Sbjct 1562 CCTACCCTGTTCAACGCCGGCACAAGACGTCCCCAGCTATCATCGTGTTTCCTTCTCACA 1621 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | | ||| ||||||||| || || | | ||| ||| ||| ||| |||| ||||| Sbjct 1622 ATCGAGGACGACTCCATTGAAGGTATCTACAACACCCTGAAGACCTGCGCGATGATCTCC 1681 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || || || || ||||| ||| || ||| | | | ||| | ||||||| Sbjct 1682 AAGAGTGCCGGAGGTATCGGACTCAACGTTCACAAGATCAGATCCAAAGAAAGCTACATC 1741 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 || |||||||| | ||| ||||| || || |||||||| || || ||||||||| | Sbjct 1742 GCTGGAACCAATGGAAACTCTAACGGACTTGTGCCTATGCTGCGTGTATTCAACAACACC 1801 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || |||||||| ||||| |||||| | | | || | || || | || || ||| Sbjct 1802 GCACGCTACGTTGACCAAGGTGGTAACAAGCGTCCTGGAGCATTTGCAATGTACCTAGAG 1861 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 ||||||||||| || | | ||| | || || |||||| || || | Sbjct 1862 CCCTGGCACGCAGATATCTTTGAGTTCCTGGATCTAAAGAAGAACACAGGTTCAGA---G 1918 Query 94258 GAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 |||| | || | || || |||| || || ||| | || || |||||| |||| Sbjct 1919 GAGATGCGCGCACGTGATCTTTTCTTCGGCCTGTGGATCAACGATCTATTTATGGAACGG 1978 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 ||| || | |||||||| || | || | ||| || || || ||| Sbjct 1979 TGCGAAGCCGACGGAGAGTGGAGTCTGTTCTCACCAAGTGATGCACCAGGCTTGGACGAT 2038 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCAAGGCCAG 94433 || || ||| | |||||||| | || |||| | ||| |||| | || | Sbjct 2039 GTCTGGGGAAAGGAGTTTGAAGATCTATACCACAAGTACG-AGCGCGAGGGTAGAGCTAA 2097 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 | || || | || | |||||||| || | || | ||| ||||| || Sbjct 2098 GCGAGTAATCAAGGCACAGCAGCTGTGGTTCGCCATTCTAGAGGCGCAGACCGAGACCGG 2157 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 || || ||||| ||| |||||| | |||| |||| ||||||||| | | || Sbjct 2158 CACACCATACATGCTGTACAAGGATGCGTGCAACCGCAAGAGTAACCAGCAGAATTTGGG 2217 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 |||||| |||| ||||||||| ||||| |||||||| |||| || ||||| | Sbjct 2218 CACCATCAAGTGCTCTAATCTGTGCTGTGAGATCGTCGAGTACTCTTCCCCCGACGAAGT 2277 Query 94614 TGCTGTGTGTAACCT 94628 ||||||||||| || Sbjct 2278 GGCTGTGTGTAATCT 2292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494448102980600