Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq27769 107 2e-18 >seq27769 Length=1647 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||||| || | ||||||||| || | | ||||||||||| ||||| || || | Sbjct 551 CCGCCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTATAATCAGCC 610 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| |||||| | ||||||||| | ||||||| ||||| || || || ||| Sbjct 611 AAAGTACGGCCGTCCTCTAATTGTTTACCTGCGAAGATTAGTCGCTGCTGATCTGGTGGT 670 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||||| ||| | | || | || || | ||||| || Sbjct 671 ATGCCTTCCTTATCTTGTATTTTAACTTTCACATTATCTATAGTATCACTAGACTCGACA 730 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | ||| | || |||||||| || || || || || |||||||| Sbjct 731 TCCAACGTGATAGTCTTACCAGTGAGCGTCTTGACGAATATCTGCAT 777 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||||||| ||||| | ||| | ||||||| || || || || ||||| Sbjct 779 CCACCTCGCAAACGTAAAACGAGATGAAGAGTTGACTCTTTCTGTATATTATAGTCAGCA 838 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || |||||||| | | |||| || ||||| || || || || Sbjct 839 AGTGTGCGGCCATCTTCAAGCTGTTTACCAGCAAAGATCAGTCGCTGCTGATCGGGGGGG 898 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| || || || | | || | || || | |||||||| Sbjct 899 ATTCCTTCCTTGTCTTGTATCTTGGCCTTCACATTATCAATCGTATCACTGGACTCCACA 958 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| || | || || ||||| || || || |||||||| |||||| Sbjct 959 TCGAGGGTGATAGTCTTTCCAGTTAGTGTCTTCACAAAAATTTGCATG 1006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495986447089200