Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq44045 114 2e-20 >seq44045 Length=9771 Score = 114 bits (126), Expect = 2e-20 Identities = 461/707 (65%), Gaps = 22/707 (3%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||| |||||||| ||||| ||| |||||| | |||| || |||||||||| Sbjct 2257 CTCGACGATCTCACAGCACAGATTAGAGCACTTGATGGTGCCCAAATTCTGCTGGTTACT 2198 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCG 205002 ||||||||| || | |||||||||| |||| | || | ||| |||| |||| | Sbjct 2197 CTTGCGGTTGCACGCATCCTTGTACAGCATGTATGGTGTGCCGGTCTCGGTCTGCGCCTC 2138 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC---CCTTGAGA 205059 |||||| | ||||| | | |||| | || || | | || || ||| | | Sbjct 2137 TAGAATGGCGAACCACAGCTGCTGTGCCTTGA-TTACT-CGCTTAGCTCTACCCTCGCG- 2081 Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGA-C 205118 |||||| || ||| || | |||| || || | || || || ||||| | Sbjct 2080 CTCGTACTTGTGGTATAGATCTTCAAACTCCTTTCCCCAGACATCGTCCAAGCCTGGTGC 2021 Query 205119 ATTTTTTGGGACACATCAGAGACCACA-TCTGATCGTCTTT-CACCCTCTCCATAAACAG 205176 || |||| | | |||| |||| || | ||| ||| |||| | |||||||| || Sbjct 2020 ATCACTTGGTG-AGAACAGACTCCACTCTCCG-TCGGCTTCGCACCGT-TCCATAAATAG 1964 Query 205177 GTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTT 205236 ||| |||||||||||||| | || |||||||| || | || | || || ||| Sbjct 1963 ATCGTTGATCCACAGGCCGAAGAAAAGATCACGTGCGCGCATCTCCTCTGAACCTGTGTT 1904 Query 205237 CTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCACACGGCCAT 205296 ||| || | ||||| | | || || |||||||| ||||||| ||| || | Sbjct 1903 CTTCTTTAGATCCAGGAACTCAAAGATATCTGCGTGCCAGGGCTCTAGGTACATTGCAAA 1844 Query 205297 TGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCG 205356 ||| || || | |||||| ||||| ||||| || ||| | | |||||| || || Sbjct 1843 TGCTCCAGGACGCTTGTTACCACCTTGGTCAACGTAGCGTGCGGTGTTGTTGAATACACG 1784 Query 205357 CAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGC---CTTC 205413 |||||| ||||| || ||||| | | | || || || | |||| ||| ||| Sbjct 1783 CAGCATAGGCACAAGTCCGTTAGAGTTTCCATTGGTTCCAGCGATG---TAGCTTTCTTT 1727 Query 205414 AGCCCTCACGTTGGAGATGGCCGCG-CCAATCCCGCCAGAACACTTGGCGATCTGGGCGC 205472 | || | || | || | | | || || || || | || ||||| |||| |||| Sbjct 1726 GGATCTGATCTT-GTGAACGTTGAGTCCGATACCTCCGGCACTCTTGGAGATCATCGCGC 1668 Query 205473 A-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAG 205531 | |||| ||| ||| ||||||| ||| | ||||| |||||| | | ||| | || | Sbjct 1667 AGGTCTT-CAGGGTGTTGTAGATACCTTCAATGGAGTCGTCCTCGATTGTGAGAAGGAAA 1609 Query 205532 CACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGG 205578 ||||| | |||| || | | ||||| |||| ||| || || || Sbjct 1608 CACGATGATAGCTGGGGACGTCTTGTGCCGGCGTTGAACAGGGTAGG 1562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794713044011600