Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq753 107 2e-18 seq30531 87.8 2e-12 >seq753 Length=412 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| ||| |||||| || ||||||||||||| ||| || || | || || Sbjct 181 ACCAAATGCAGTGTTGACTCCTTCTGAATATTGTAGTCGGCTAGTGTACGTCCATCTTCC 240 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | |||||| || || || || || |||||||| || | || | | |||||| ||| | Sbjct 241 AACTGCTTTCCAGCAAAAATTAAACGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGG 300 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 || || ||| | | | | || ||||| ||||| ||||||| ||||| || || Sbjct 301 ATTTTAGCCTTCACATTATCGATAGTATCGCTAGATTCAACATCCAGGGTGATTGTCTTT 360 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || |||||||| ||||| Sbjct 361 CCAGTGAGAGTCTTGACAAAGATCTGCAT 389 Score = 82.4 bits (90), Expect = 9e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || |||||||| ||||| || |||| ||||||||| || | || | | ||||| Sbjct 7 TCCTCAAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGAGGGATACCTTCCTTA 66 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| |||||| ||||| | | | || ||||| ||| ||||| | ||| || Sbjct 67 TCCTGAATCTTCGCCTTGACGTTATCAATTGTATCGCTGCTTTCTACATCAAGCGTAATA 126 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || |||||||||||||| ||||| Sbjct 127 GTCTTACCAGTAAGAGTTTTAACAAAGATCTGCAT 161 >seq30531 Length=1940 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| || ||||| ||||||||||| ||| ||||| ||||| |||||||| | | Sbjct 799 CCACCTCGTAGACGCAGTACCAGATGCAAGGTAGATTCCTTCTGGATGTTGTAGTCCGCT 740 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 || ||||| | || || | |||||| ||||| || |||| |||||||| || Sbjct 739 AGGGTGCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAGACGCTGCTGATC 687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564924092122200