Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq42503 163 1e-34 seq36005 140 1e-27 seq43407 138 4e-27 seq27769 125 3e-23 seq753 107 8e-18 >seq42503 Length=6233 Score = 163 bits (180), Expect = 1e-34 Identities = 460/701 (66%), Gaps = 13/701 (2%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 || ||||||||| ||||| || ||||| | ||||| || ||||| | ||| |||| || Sbjct 3418 AGTAATTGGAATCGATCTCGGTACCACTTACTCATGCGTTGGTGTATTCCAGCATGGCAA 3359 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 || || || || || ||||| ||||| ||||| || || || | || ||| || Sbjct 3358 GGTTGAGATCATCGCCAATGATCAAGGCAACCGAACAACGCCCTCGTACGTTGCTTTCAC 3299 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090 || || || |||| ||||| | || ||||| ||||| || | || | Sbjct 3298 AGACTCTGAGCGACTATTAGGAGACGCAGCTAAGAATCAAATCGCTCTTAACCCGC--AC 3241 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 ||||| || | |||||||| ||| | || ||||| | || | |||| | || || Sbjct 3240 AACACCGTGTTCGATGCTAAGCGTCTGATAGGCCGAAAGTTTAATGACAAAGAAGTGCAG 3181 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAA 451210 ||| || ||| || | || || || | ||||| ||||| | | ||| Sbjct 3180 GCAGATGTGAAGCACTTCTCATTCGAAGTTGTGGAACAAAATAAGAAGCCAGCTGTACAA 3121 Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270 || | || | | ||||| || | || ||||| || || || |||||||| || Sbjct 3120 GTGGAGTACATGGCTGAAAAGAAGATATTCTTACCTGAGGAGATATCGTCTATGGTGCTG 3061 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 || |||||||||||||| ||||| ||| | || || ||| || || || || || Sbjct 3060 ACCAAAATGAAAGAAACGGCAGAGGCTTATTTGGGAACTAAAGTGACAGACGCCGTGATC 3001 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 || || || || |||||||||||| ||||| ||||| || || ||||| || ||| Sbjct 3000 ACGGTGCCAGCATATTTCAATGATTCACAAAGGCAAAGTACAAAGGATGCTGGGGCTATC 2941 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||||| ||||||| || || || || || || || ||||| ||||| | || || || Sbjct 2940 GCTGGTCTAAATGTGCTACGTATAATCAACGAGCCCACAGCCGCTGCGATTGCGTACGGT 2881 Query 451451 CTAGGAAAATCAAAAG----AAAC--AGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 || ||| || || | ||| | || || || || || | || ||| ||||| Sbjct 2880 CT-GGACAA--GAAGGCCGCCAACGATGGCGAGAAGAAGATCCTAATTTTCGATCTTGGT 2824 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 ||||| || ||| | | |||| | | || | || |||| || || ||||| Sbjct 2823 GGAGGCACATTTGACGTTAGTATACTCACCCTGGATCAAGGCATATTCGAGGTCAAGGCT 2764 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| ||| || || || | ||||| || ||| |||| || Sbjct 2763 ACCGCTGGCGACACACACTTGGGAGGCGAGGATTTTGACAA 2723 >seq36005 Length=2846 Score = 140 bits (154), Expect = 1e-27 Identities = 457/698 (65%), Gaps = 23/698 (3%) Strand=Plus/Plus Query 450916 AATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGT 450975 ||| || |||||||| || || |||| |||||| || | | | || | || || | || Sbjct 842 AATCGGCATTGATCTCGGTACTACCTATTCATGCGTTGCTATCTATGATAACGGTAGGGT 901 Query 450976 AGAAATTATAGCAAATGACCAAGGATCAC-GAACTACTCCTTCATGGGTAAGTTTTACGG 451034 ||| || ||| | ||||| ||||| | || | | || ||||| | || | ||||||| Sbjct 902 AGACATAATACCCAATGATCAAGG-TAACAGGATAACACCTTCGTATGTGGGGTTTACGG 960 Query 451035 ---ATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAA 451089 | ||| || | | || | |||||||| |||| | | | || ||| | || Sbjct 961 CCGAGGGAGAGCGATTAATCGGAGATGCTGCTAAGAATCA--GCTGACCTCGAATCCGAA 1018 Query 451090 AAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACA 451149 ||| || |||| || || || || || | || ||| | ||||||| ||||| || Sbjct 1019 AAATACTGTATTCGACGCAAAGCGGTTGCTCGGACGTGACTGGGATGATGCAACTGTCCA 1078 Query 451150 AAAAGAGAAAAAATTCTTTTCTTATGATGTAGTA-AATCAAAAAGGAAAGCCCTATATTC 451208 | | || || | |||| | | ||| |||| |||| || || ||| ||| Sbjct 1079 ACACGATCGCAAGTACTTTCCCTTCGATCTAGTTGAATCCGGAAACAA-GCCAAGGATTA 1137 Query 451209 AAGTAAATTA---TAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGG 451265 | || | || ||||| | | | || | | ||||| ||||| ||| |||||| Sbjct 1138 AGGTGGACACAGCTATCGGTGAGAAGATA-CTGT--CACCTGAGGAAATCTCAGCTATGG 1194 Query 451266 TTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAG 451325 |||| ||||||||||| ||||| ||| | ||| ||| | | || | Sbjct 1195 TTCTCGGACGTATGAAAGAAACTGCAGAGACCTATTTAGGTAAAGAAGTCAAACACGCCG 1254 Query 451326 TAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGAC 451385 | || || || || |||||||||||||| ||||| |||||| ||||||||||| || Sbjct 1255 TTATCACAGTACCTGCTTATTTCAATGACGCACAGAAGCAAGCTACTAAAGATGCCGGCG 1314 Query 451386 ATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCAT 451445 || ||||| | ||||| | || ||||||||||| || || || |||||| | |||| Sbjct 1315 CCATCGCTGGACTGAATGTGGTGCGTATTATTAATGAGCCCACGGCCGCTGCTATTGCAT 1374 Query 451446 ATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTG 451505 | || | |||| | || | || ||||| |||||| | || || ||| |||| | Sbjct 1375 ACGGTTT----AAATGATCAGGA--AGGTGAAAAGAATATTCTGGTCTTCGATCTTGGCG 1428 Query 451506 GAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAA 451565 | || || ||| ||| || | | | || | || || |||||||| || | Sbjct 1429 GCGGGACATTCGATGTTTCGGTCTTGACGTTGGACCAGGGTGTGTTTGAAGTTTTAGCTA 1488 Query 451566 CCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 | | |||||| || ||||| || ||||||||| | ||| Sbjct 1489 CTAGTGGTGACACGCATCTGGGCGGTGAAGATTTCGAT 1526 >seq43407 Length=7713 Score = 138 bits (152), Expect = 4e-27 Identities = 455/699 (65%), Gaps = 15/699 (2%) Strand=Plus/Plus Query 450916 AATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGT 450975 ||| || || |||||||| ||||| | |||||||| ||||| | ||| | ||||| || Sbjct 4391 AATCGGTATCGATCTTGGTACCACATACTCATGTGTCGGTGTATTCCAGCACGGAAAGGT 4450 Query 450976 AGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGA 451035 ||| || || | || |||||||| || || || || || | || ||| ||||| Sbjct 4451 AGAGATCATCTCCAACGACCAAGGTAACCGTACAACGCCCTCTTATGTTGCTTTCACGGA 4510 Query 451036 TTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAAAACA 451094 || || ||||||| || | || || || | | | |||| || | || |||| Sbjct 4511 CTCCGAGCGACTTTTGGGAGACGCCGCGAAGAACCA-GGTAGCGCTCAACCCTAATAACA 4569 Query 451095 CAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAG 451154 | |||| ||||| ||||| ||||||||||| || | |||| ||||| ||| Sbjct 4570 CGGTATTCGATGCCAAACGATTAATTGGCCGACAGTTTAATGACAGCGAAGTACAGGAAG 4629 Query 451155 AGAAAAAATTCTTTTCTTATGATGTAGT--AAATCAAAAAGGAAAGCCCTATATTCAAGT 451212 | ||| ||| || | | || || | | || ||| ||||| || | || Sbjct 4630 ATCTAAAGCACTTCTCATTCAAAGTTGTGGAGAAGAACAAG--AAGCCAGCGATCAAGGT 4687 Query 451213 AAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTAC 451272 | | |||| | ||| || || || |||||||| || || || ||||| || || Sbjct 4688 AGAGTATATGGCCGAAGAGAAGACATTCTTGCCTGAAGAGATATCCTCAATGGTGCTGAC 4747 Query 451273 TAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTAC 451332 || ||||| ||||| || || || | || | ||| || || || || ||||| Sbjct 4748 AAAGATGAAGGAAACGGCCGAGGCTTACTTGGGAACCAAAGTGACCGACGCTGTGATTAC 4807 Query 451333 TGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGC 451392 ||| || || |||||||||||| | ||| ||||| || || ||||| || ||| || Sbjct 4808 TGTGCCTGCATATTTCAATGATTCTCAAAGGCAAAGTACAAAGGATGCTGGGGCTATCGC 4867 Query 451393 TGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 ||| | || || || || || || || || || || || ||||| | || |||||| | Sbjct 4868 AGGTCTGAACGTGCTACGTATCATCAACGAGCCAACGGCTGCTGCGATTGCCTATGGA-T 4926 Query 451453 AGGAAAATCAAAAG-----AAACA-GAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGG 451506 ||| || || | || | | || || || ||| || | || || |||| || Sbjct 4927 TGGACAA--GAAGGCCGCCAATGAGGGGGAGAAGAAAATTCTAATTTTCGACCTTGGAGG 4984 Query 451507 AGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAAC 451566 ||| || ||| | |||| || || || || || || || ||||| || | || Sbjct 4985 AGGTACCTTCGATGTAAGTATACTCTCCATCGATGACGGTGTGTTCGAAGTCAAATCTAC 5044 Query 451567 CAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 |||||| || || | |||||||||||| | || || Sbjct 5045 TGCTGGTGACACACACTTGGGAGGTGAAGATTTCGACAA 5083 >seq27769 Length=1647 Score = 125 bits (138), Expect = 3e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || |||||||| ||||| || | ||||| || || | Sbjct 777 ATGCAGATATTCGTCAAGACGCTCACTGGTAAGACTATCACGTTGGATGTCGAGTCTAGT 718 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | ||| ||||| |||||||||||||| || || || ||||| Sbjct 717 GATACTATAGATAATGTGAAAGTTAAAATACAAGATAAGGAAGGCATACCACCAGATCAG 658 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || |||| ||| |||| |||||| | || || || | |||||||| |||||||| Sbjct 657 CAGCGACTAATCTTCGCAGGTAAACAATTAGAGGACGGCCGTACTTTGGCTGATTATAAC 598 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | |||||||| || ||| | ||||| Sbjct 597 ATCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTAAGAGG 554 Score = 102 bits (112), Expect = 3e-16 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || ||||| ||||| || ||||| || || ||||| || || | Sbjct 1005 ATGCAAATTTTTGTGAAGACACTAACTGGAAAGACTATCACCCTCGATGTGGAGTCCAGT 946 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || || || ||||| ||||||||||| || || ||||| Sbjct 945 GATACGATTGATAATGTGAAGGCCAAGATACAAGACAAGGAAGGAATCCCCCCCGATCAG 886 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || || | || ||||| ||||||||||| | || | || || |||||| Sbjct 885 CAGCGACTGATCTTTGCTGGTAAACAGCTTGAAGATGGCCGCACACTTGCTGACTATAAT 826 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | || || |||| ||||| | || ||| | || |||| Sbjct 825 ATACAGAAAGAGTCAACTCTTCATCTCGTTTTACGTTTGCGAGG 782 >seq753 Length=412 Score = 107 bits (118), Expect = 8e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || ||||| || || || || || ||||||||||| Sbjct 389 ATGCAGATCTTTGTCAAGACTCTCACTGGAAAGACAATCACCCTGGATGTTGAATCTAGC 330 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | || ||||| || |||||||| || || ||||||||||| Sbjct 329 GATACTATCGATAATGTGAAGGCTAAAATCCAGGATAAGGAGGGTATCCCTCCTGATCAG 270 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||||||||| | || || || | ||||||||| | || | || || || ||| Sbjct 269 CAGCGTTTAATTTTTGCTGGAAAGCAGTTGGAAGATGGACGTACACTAGCCGACTACAAT 210 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| ||||||| || || || Sbjct 209 ATTCAGAAGGAGTCAACACTGCATTTGGT 181 Score = 86.0 bits (94), Expect = 2e-11 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAAT-CATC 391108 ||| | || || |||||||| || |||||||| |||||||| |||||||| ||| || | Sbjct 161 ATGCAGATCTTTGTTAAAACTCTTACTGGTAAGACTATTACGCTTGATGTAGAAAGCAGC 102 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||||| | || || ||||| ||||||||||| || ||||| ||||| Sbjct 101 -GATACAATTGATAACGTCAAGGCGAAGATTCAGGATAAGGAAGGTATCCCTCCGGATCA 43 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207 || || | || || | || || || ||||| ||||| Sbjct 42 GCAGCGCCTGATCTTTGCCGGAAAGCAGCTTGAGGATGG 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974592311514380