Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq42503 244 8e-59 seq43407 150 1e-30 seq36005 111 1e-18 seq37929 98.7 8e-15 seq43121 89.7 4e-12 >seq42503 Length=6233 Score = 244 bits (270), Expect = 8e-59 Identities = 955/1484 (64%), Gaps = 42/1484 (3%) Strand=Plus/Plus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 ||||| ||| | ||| || || |||||||| ||||| | |||||| || ||||| || Sbjct 1949 TTATCTTGGGCGGACACGTTGAGTATACCATTCGCATCGATATCAAAGGTAACTTCGATC 2008 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 || || ||||| ||||||| | || || | | || ||| | ||||| || | Sbjct 2009 TGGGGTGTTCCTCTGGGAGCAGGGGTAATGCCGACAAGATCAAAGGCGCCCAGCTTGTGG 2068 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 || ||||| || | ||| ||||||||| | | || || | || | | ||||| Sbjct 2069 TTGTCTTTCGTCATGGCTCGCTCACCCTCGTACACCTGAATGGACACAGCTGGCTGATTG 2128 Query 517430 TCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTC----TAT 517484 || | |||||| | || |||| ||| || ||||| || ||||| | ||| Sbjct 2129 TCAGCATAAGTGGAGAAGG-TCTGTGTTTGCTTTGTGGGAATGGTGGTGTTGCGCTTTAT 2187 Query 517485 CAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACAT 517544 || | | |||||| | |||||| || || || | ||| | || | |||| ||||| Sbjct 2188 CAGTGA----GGTCATCACACCACCGGCGGTCTCAATACCCATTGACAACGGAGCGACAT 2243 Query 517545 CAACTAGGACAATATTTT-GA---AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCT 517600 | | || | || || | || || | | | || | ||| ||||| || | Sbjct 2244 CCAAAAGCAAAAGATCTGAGACTGAGCTGTGC----GTGTCACCCCTGAGAATGGCACCC 2299 Query 517601 TGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTA 517660 |||| || || |||||||| || |||||||| ||| | | | || || | |||| Sbjct 2300 TGAACTGCGGCGCCATATGCGACTGCTTCATCTACATTGATGCTCTTGTTCAGCTCTTTA 2359 Query 517661 CCATTGAAAAAATTTGAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAAC 517719 |||||||| | | ||||| | | ||| | ||| |||||||||| || || || || Sbjct 2360 CCATTGAAGCACTCAGAAAGTAACT-TCTGAATCTTCGGAATACGAGTAGAACCACCTAC 2418 Query 517720 TAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC 517779 | ||||| |||| | || || |||| ||| | ||| |||| |||| || || Sbjct 2419 CAGCACAATCTCATCGATACTCGACTTGTCCATTTTCGCATCTCGTAAAGCTTTCTCCAC 2478 Query 517780 GGGTTCAAGAC--CCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTA 517837 ||||| || |||| ||| | || | ||| | |||||| ||| ||||| ||| Sbjct 2479 TGGTTCTAGTGTGCCGCGGAAAAGA--TCGGCACACATTTCTTCAAATCGAGCTCGAGTG 2536 Query 517838 AG---AGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGA 517894 | |||| | |||| | || ||||| | |||||| | ||| | | | || Sbjct 2537 ATGCTAGTG---TAGAAATCGGTACCCTCGAAAAGAGAATCGATTTCTACATTGGCCTGC 2593 Query 517895 GTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCT 517954 | ||||| || | | ||||||||| || ||||| || | | ||| || | || Sbjct 2594 GCAGAAGACGACAACGTACGTTTAGCCTTCTCGCATGCCGTTCGCAATCTACGCATCGCC 2653 Query 517955 TTTGCTGATTG-ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGT 518013 ||||| | ||| | ||| ||| | || | ||| | || ||| || | | | | Sbjct 2654 TTTGC-GTTTGTAGTCAGATCCTTCTTGTTTTTACGCTGGAACTCCTTCGCGAAATGGGC 2712 Query 518014 TACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTAC 518073 || | ||| || |||||||| || |||||||| | || | || | ||||| | || Sbjct 2713 AACCATACGGTTGTCAAAATCCTCGCCTCCCAAGTGTGTGTCGCCAGCGGTAGCCTTGAC 2772 Query 518074 TTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATC 518133 | ||| | || | || || | | | | | || ||| || || ||||| | ||| Sbjct 2773 CTCGAATATGCCTTGATCCAGGGTGAGTATACTAACGTCAAATGTGCCTCCACCAAGATC 2832 Query 518134 AAAAATAAGTACATTCATTTCTTTGTC-TTGG-----TTTTTATCAAGACCATACGCAAA 518187 ||||| || | ||| | || || |||| || || || ||||| ||||||| Sbjct 2833 GAAAATTAGGATCTTCTTCTCGCCATCGTTGGCGGCCTTCTTGTCCAGACCGTACGCAAT 2892 Query 518188 AGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGC 518247 ||||| || || || || || || || | | ||||| |||||||| || || || Sbjct 2893 CGCAGCGGCTGTGGGCTCGTTGATTATACGTAGCACATTTAGACCAGCGATAGCCCCAGC 2952 Query 518248 ATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 518307 ||| || || ||| ||||||||||| || |||||||| || || || || ||||| || Sbjct 2953 ATCCTTTGTACTTTGCCTTTGTGAATCATTGAAATATGCTGGCACCGTGATCACGGCGTC 3012 Query 518308 AGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGA 518367 || |||| | || | |||||| |||||||| ||||||||| | | | ||| || Sbjct 3013 TGTCACTTTAGTTCCCAAATAAGCCTCTGCCGTTTCTTTCATTTTGGTCAGCACCATAGA 3072 Query 518368 TGAAATTTGTTCTGG--GGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATAT 518425 || || | || || |||||| ||| |||| || |||| | | | Sbjct 3073 CGATATCTCCTCAGGTAAGAATAT--CTTCTTTTCAGCCATGTACTCCACTTGTACAGCT 3130 Query 518426 GGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTT 518485 || || ||| | | ||||| |||| ||| |||| ||||| || || | Sbjct 3131 GGCTTCTTATTTTGTTCCACAACTTCGAATGAGAAGTGCTTCACATCTGCCTGCACTTCT 3190 Query 518486 TGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTA 518545 | ||||||||| | || || || | || || ||||| || | || ||| || ||| Sbjct 3191 TTGTCATTAAACTTTCGGCCTATCAGACGCTTAGCATCGAACACGGTGTTGTGCGGGTTA 3250 Query 518546 ATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACA 518605 | || ||||| || ||||| ||||| | || | || | ||||| || | ||| Sbjct 3251 AGAGCGATTTGATTCTTAGCTGCGTCTCCTAATAGTCGCTCAGAGTCTGTGAAAGCAACG 3310 Query 518606 TATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGC 518665 || || || ||||| || || ||||||||||| || || || ||||| || |||| || Sbjct 3311 TACGAGGGCGTTGTTCGGTTGCCTTGATCATTGGCGATGATCTCAACCTTGCCATGCTGG 3370 Query 518666 CATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 518709 ||||||| || || |||| || || | ||| || ||||| Sbjct 3371 AATACACCAACGCATGAGTAAGTGGTACCGAGATCGATTCCAAT 3414 >seq43407 Length=7713 Score = 150 bits (166), Expect = 1e-30 Identities = 900/1433 (63%), Gaps = 16/1433 (1%) Strand=Plus/Minus Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317 ||||| ||||||||| |||||||| ||||| | |||||| ||||| ||||| || || Sbjct 5849 GGCAGACACATTAAGGATACCATTAGCATCGATATCAAAGGTGACCTCAATCTGGGGTGT 5790 Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377 ||||| ||||||| | || || | | ||| | |||| || | || || || Sbjct 5789 TCCTCTGGGAGCAGGGGCAATACCAGTAAGGTCAAAGGCACCCAACTTGTGGTTGTCCTT 5730 Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437 || | ||||||||||||| ||| || |||| || | | |||||| || | || Sbjct 5729 TGTCATGGCTCGTTCACCCTCGTAAACCTGAATAGACACCGCTGGTTGATTGTCAGCGTA 5670 Query 517438 AGTTGTAAATACTCTGGATTTTTTACAAGGA-ATTGTTGTGTTTCTATCAATAATATTGG 517496 || | ||| |||| | | | | || || || ||||| | | || | | Sbjct 5669 TGTGGAAAAGG-TCTGTGTCTGCTTCGTGGGGATGGTGGTGTTGCGCTTGATTAAGGAAG 5611 Query 517497 TCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 517556 |||| | ||||| || || |||| ||| | ||| || || | || || | ||| | | Sbjct 5610 TCATCACTCCACCGGCAGTCTCTATACCCATAGATAGGGGTGCCACGTCCAGTAGTAGCA 5551 Query 517557 TATTT-TGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 || ||| | | || || | || ||||| ||| |||| | ||| || ||| Sbjct 5550 GATCGCTGACGGCGCTG-TCTGTGTCGCCTCTCAGAATGGCTCCTTGGACAGCCGCTCCA 5492 Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 517675 || || || || ||||| || | | | || || | ||| || ||||| ||| Sbjct 5491 TAGGCTACGGCCTCATCCACGTTGATGCTCTTGTTCAGCTCTTTGCCGTTGAAGTAATCA 5432 Query 517676 GAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 517734 || | |||| ||| | ||| |||||||| | || || ||||| | ||| ||||||| Sbjct 5431 GACAATAGTT-TCTGAATCTTTGGAATACGGGTGGAACCGCCAACCAGTACGATTTCATC 5373 Query 517735 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGC 517794 | ||| || || | |||| ||| || | ||||| || ||||| || | Sbjct 5372 GATACTTGACTTGTCAAACTTTGCATCTCGCAATGCCTTTTCTACTGGTTCCAGTGTGCC 5313 Query 517795 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 517854 ||| ||||||||| ||| | || ||||| || | || | || | |||| Sbjct 5312 TCTGAACAAGTCTACACACATCTCCTCGAAACGTGCGCGTGTGATGGTTGTGTAGAAATC 5253 Query 517855 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 517914 | || ||||| | ||| || | |||| | | || | || || || || | ||| Sbjct 5252 AGCGCCCTCGAAAAGAGAGTCGATCTCAACATTGGCCTGCGCGGACGACGAAAGCGTACG 5193 Query 517915 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATC 517974 ||| || || || || || || | || || | ||| || |||| | | ||| Sbjct 5192 TTTCGCCTTCTCGCACGCCGTTCTCAACCTACGCATAGCTCGCGCGTTTTGAGTTAGATC 5133 Query 517975 TGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATC 518034 | || || | | ||| || | | | | ||| | | || || ||||| Sbjct 5132 CTTCTTGGTCTTACGTTGGAACTCCTTGGCGAAATGAGCTACCAATCTGTTGTCGAAATC 5073 Query 518035 TTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAG 518094 |||||||||||| | || | || | |||| | | |||| ||| | || || || | Sbjct 5072 TTCACCTCCCAAGTGTGTGTCACCAGCAGTAGATTTGACTTCGAACACACCGTCATCGAT 5013 Query 518095 AGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC 518154 || | | | ||||||| ||| || || || | || ||||| || | ||| | || Sbjct 5012 GGAGAGTATACTTACATCGAAGGTACCTCCTCCAAGGTCGAAAATTAGAATTTTCTTCTC 4953 Query 518155 TTTGTC-TTGG-----TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208 || |||| || || || | ||||| |||| |||||||| ||||| || || Sbjct 4952 CCCCTCATTGGCGGCCTTCTTGTCCAATCCATAGGCAATCGCAGCAGCCGTTGGCTCGTT 4893 Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268 || || | | || || ||||| || || || ||||| || || ||| ||||| Sbjct 4892 GATGATACGTAGCACGTTCAGACCTGCGATAGCCCCAGCATCCTTTGTACTTTGCCTTTG 4833 Query 518269 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATA 518328 ||||| || ||||||||||| |||||||| || || || || |||| | || | || Sbjct 4832 AGAATCATTGAAATATGCAGGCACAGTAATCACAGCGTCGGTCACTTTGGTTCCCAAGTA 4773 Query 518329 AGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATA 518388 ||| ||||||| ||||| || | | | |||||| || || | ||| || | | Sbjct 4772 AGCCTCGGCCGTTTCCTTCATCTTTGTCAGCACCATTGAGGATATCTCTTCAGGCAAGAA 4713 Query 518389 TTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC 518448 | ||| ||| ||| ||| | | ||| || || | | ||| Sbjct 4712 TGTCTTCTCTTCGGCCATATACTCTACCTTGATCGCTGGCTTCTTGTTCTTCTCCACAAC 4653 Query 518449 TTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTG--GTCATTAAAATCTCTACCA 518506 ||| |||| ||| || | |||| || |||| | ||||||||| | || ||| Sbjct 4652 TTTGAATGAGAAGTGCTTTAGATCTTCCTG--TACTTCGCTGTCATTAAACTGTCGGCCA 4595 Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCT 518566 ||||||||||| ||||| || | || || | || || | || | || | || || Sbjct 4594 ATTAATCGTTTGGCATCGAATACCGTGTTATTAGGGTTGAGCGCTACCTGGTTCTTCGCG 4535 Query 518567 GCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 518626 || ||||| | || | || | || || || | |||||| || || ||||| || ||| Sbjct 4534 GCGTCTCCCAAAAGTCGCTCGGAGTCCGTGAAAGCAACATAAGAGGGCGTTGTACGGTTA 4475 Query 518627 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 ||||| || || | || || || || || || | || ||||||| ||||| Sbjct 4474 CCTTGGTCGTTGGAGATGATCTCTACCTTTCCGTGCTGGAATACACCGACACA 4422 >seq36005 Length=2846 Score = 111 bits (122), Expect = 1e-18 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 518176 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 518235 ||| || |||| |||||| || || || ||||||||||| | || ||||| || ||||| Sbjct 1379 ACCGTATGCAATAGCAGCGGCCGTGGGCTCATTAATAATACGCACCACATTCAGTCCAGC 1320 Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 || || ||||||||||| ||||| | |||| || || ||||| ||||| || || Sbjct 1319 GATGGCGCCGGCATCTTTAGTAGCTTGCTTCTGTGCGTCATTGAAATAAGCAGGTACTGT 1260 Query 518296 AATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCAT 518349 |||||||| | | ||||||||||| | ||| | ||| |||| |||||| Sbjct 1259 GATAACGGCGTGTTTGACTTCTTTACCTAAATAGGTCTCTGCAGTTTCTTTCAT 1206 >seq37929 Length=3400 Score = 98.7 bits (108), Expect = 8e-15 Identities = 200/296 (68%), Gaps = 6/296 (2%) Strand=Plus/Plus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || ||||| | ||| ||||| ||||| ||||| | ||||| ||| | || || | || Sbjct 1702 ACCAGACGGTCATCGAAATCCTCACCACCCAAGTGAGTATCTCCAGCAGTGGCCTTGACA 1761 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 ||| | ||| | |||| | | |||| ||||| ||| ||||| || | ||| Sbjct 1762 GTGAACACACCACCGTCAATGGTTAGTAGAGACACATCGAAGGTACCACCTCCAAGATCG 1821 Query 518135 AAAATAAGTACATTCATTTC-----TTTG-TCTTGGTTTTTATCAAGACCATACGCAAAA 518188 || ||||| || | || | || || | || ||||||||||| || |||| | Sbjct 1822 AAGATAAGCACGGTGCGCTCACCCTTCTGCTCGTTCTTGTTATCAAGACCGTAGGCAACA 1881 Query 518189 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 518248 ||||| ||||| || || || || || | | ||| | |||||||| || || || Sbjct 1882 GCAGCGGCAGTAGGCTCGTTGATGATACGAAGAACCTCTAGACCAGCGATGGCACCGGCG 1941 Query 518249 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 || || || || || | || |||||||| |||||||| || ||||| || || || Sbjct 1942 TCCTTGGTAGCCTGACGCTGAGAATCGTTGAAATATGCGGGTACAGTGATGACAGC 1997 >seq43121 Length=7161 Score = 89.7 bits (98), Expect = 4e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 518488 GTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAAT 518547 ||| ||||| | | ||| || || ||||| ||||||| | ||||| || ||||| | Sbjct 6144 GTCGTTAAACTTCCGACCTATCAAGCGTTTGACATCAAACACCGTATTCGTCGGATTTAG 6203 Query 518548 TGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATA 518607 ||| || | ||||| |||||||| | || | || || || || || | ||| || Sbjct 6204 AGCAATCTGGTTCTTGGCCGCATCTCCTAATAGTCGCTCAGTGTCAGTGAAAGCAACGTA 6263 Query 518608 TGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCA 518667 ||| || || ||||| || ||||||||||| | || || || || |||||| ||| | Sbjct 6264 TGAGGGCGTGGTGCGGTTTCCTTGATCATTGGAGATGATCTCCACCCTACCATGTTGGAA 6323 Query 518668 TACACCTACACA 518679 ||||| || || Sbjct 6324 AACACCAACGCA 6335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3778614907766410