Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq44045 152 6e-32 >seq44045 Length=9771 Score = 152 bits (168), Expect = 6e-32 Identities = 948/1502 (63%), Gaps = 44/1502 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| | ||||| || | ||||||||||| || || || ||| | | Sbjct 1454 CCTCAGCACATGCTTATGCGTGTGAGTGTGGGTATCCATGGCGACGACATCGATGGGGCT 1513 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | || |||||| |||| | || | ||| ||| | ||||| |||| ||||| ||| Sbjct 1514 ATTGAAACATACAACAACCTATCACAGGGTTGGTTTACACACGCTTCACCTACCCTGTTC 1573 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| || ||| | | ||||| | || ||||||||| | ||| | |||| || Sbjct 1574 AACGCCGGCACAAGACGTCCCCAGCTATCATCGTGTTTCCTTCTCACAATCGAGGACGAC 1633 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || || | || || ||| ||| || | || || ||||| ||| | || || Sbjct 1634 TCCATTGAAGGTATCTACAACACCCTGAAGACCTGCGCGATGATCTCCAAGAGTGCCGGA 1693 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCC-AACAAGTCTCGTATTAGAGGTACAAA 111910 |||||||| | || | || | ||||| || || || || || || || || Sbjct 1694 GGTATCGGACTCAACGTTCACAAGATCAGATCCAAAGAAAGCT-ACATCGCTGGAACCAA 1752 Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970 ||| | || | || || | || ||||| || ||||| ||| ||| || ||||| || Sbjct 1753 TGGAAACTCTAACGGACTTGTGCCTATGCTGCGTGTATTCAACAACACCGCACGCTACGT 1812 Query 111971 AAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 |||||| ||| ||||| ||| | | ||| | || || ||||| ||||| Sbjct 1813 TGACCAAGGTGGTAACAAGCGTC---CTGGAGCATTTGCAATGTACCTAGAGCCCTGGCA 1869 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||| |||||| | |||||||| || | ||| |||| |||||| ||| Sbjct 1870 CGCAGATATCTTTGAGTTCCTGGATCTAAAGAAGAACACAGGTTCAGAGGAGATGCGCGC 1929 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCAT-GAAGAGAGTTGAGGAGA 112143 || ||||| |||| || || ||||| ||||| || || ||| | | || || Sbjct 1930 ACGTGATCTTTTCTTCGGCCTGTGGATCAACGATCTATTTATGGAACGGTGCGAAGCCGA 1989 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203 || | ||| ||| || | ||| | ||||| || | ||||| | ||| Sbjct 1990 -CGGAGAGTGGAGTCTGTTCTCACCAAGTGATGCACCAGGCTTGGACGATGTCTGGGGAA 2048 Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGC 112263 |||||||||||| || ||| ||||||||| || || | || | |||| | Sbjct 2049 AGGAGTTTGAAGATCTATACCACAAGTACGAGCGCGAGGGTAGAGCTA-AGCGAGTAATC 2107 Query 112264 CAGCTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 || | | | ||||| || ||||| || | || |||||||| || |||||||| Sbjct 2108 AAGGCACAGCAGCTGTGGTTCGCCATTCTAGAGGCGCAGACCGAGACCGGCACACCATAC 2167 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 ||||| ||||| || || || |||| |||||||| || |||||||||| |||||| Sbjct 2168 ATGCTGTACAAGGATGCGTGCAACCGCAAGAGTAACCAGCAGAATTTGGGCACCATCAAG 2227 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 | || || || || || ||| | || | | | || || |||||||||| Sbjct 2228 TGCTCTAATCTGTGCTGTGAGATCGTCGAGTACTCTTCCCCCGACGAAGTGGCTGTGTGT 2287 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGT--GGATC--CAGAGACAAAGAC-----A 112493 || || || || | || || || ||||| || || | | ||| || | | Sbjct 2288 AATCTTGCGTCCCTGGCCCTGCCTAAGTACGTCAAGACCGACGGAGCAAACGGCCCCGAG 2347 Query 112494 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553 || || | || || ||| | || || || | || | ||| || ||||||| | | Sbjct 2348 TTCGACTTTGTGAAGCTCGAGGAGGTCACCAGAATAGCCACGCGCAATCTAAACAAAATC 2407 Query 112554 ATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGT 112610 || || || | |||||| || ||| ||| || ||| | | | ||||| Sbjct 2408 ATCGACGTCAACTATTACCCTGTGCCTGA---AGCTGAGAAGAGTAACAAGCGCCACCGA 2464 Query 112611 CCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGT-CGCCACGCATT 112669 || || ||||| ||||| ||||| || || || | |||| |||| | |||| |||| Sbjct 2465 CCTATCGGTCTAGGTGTACAAGGCCTTGCAGACGCGTTCA-TCTTGATGCGCCTGCCATT 2523 Query 112670 TGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGC 112729 ||| | ||| || | | || || || || ||||| || || || || Sbjct 2524 CGATAGCCCCGATGCACGCGTGCTGAACAAGCACATCTTCGAGACTATCTACTACAGTGC 2583 Query 112730 TCTTGAGGCGAGTTCGGAGTTGGC--AGAGGTTGATGGTCCATATGAAACCTTTGAGGGT 112787 | || |||| | | | || ||||| || ||||| || || |||| | ||| Sbjct 2584 GGTGACGGAGAGTATTGCGATTGCCAAGAGG--GAGGGTCCTTACGAGACCTACGCTGGT 2641 Query 112788 TCTCCAGCTTCACAAGGGGTGCTT-CAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA 112846 || ||||| |||||| ||| || || ||||||||||| | || || | | Sbjct 2642 TCCCCAGC-GAGCAAGGGTATCTTGCAGTTCGATATGTGGGATGTTGTCCCCTCGGATAG 2700 Query 112847 CTACGACTGGGACGCTCTCAAGGAACGCATCAAGG---AGAAGGGTCTTCGTAACAGTCT 112903 |||| |||| ||||||| | || | || | || || | || || Sbjct 2701 ACACGATTGGGCTAAGGTCAAGGA--GGAT-ATGGCTTTATACGGACTCAGAAATTCACT 2757 Query 112904 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 112963 |||| | || || ||||| || || ||| || || || |||||||||| || || | Sbjct 2758 TTTGGTCGCCCCTATGCCTACCGCTAGCACAGCTCAGATTCTGGGTAATAACGAGAGCAT 2817 Query 112964 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 113023 || |||||||| |||||||||| | | ||| | |||||||| |||||| Sbjct 2818 AGAGCCCTACACATCGAACATCTACACACGTCGTGTGCTCTCAGGAGAGTTCCAGATTGT 2877 Query 113024 CAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 113083 |||| ||||||| || | ||||||| || | || | ||| || ||||||||| | Sbjct 2878 CAACCAGCATCTGCTGAAGGACCTCACTGATCTGGGATTGTGGGACACAGATATGAAGAA 2937 Query 113084 TC 113085 || Sbjct 2938 TC 2939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620397228429200