Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq43298 89.7 6e-13 >seq43298 Length=7455 Score = 89.7 bits (98), Expect = 6e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 153746 TGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCA 153805 |||||| | ||||||| || ||| | || ||| |||| |||||||||| ||||| || Sbjct 2760 TGATATAGTGGTAGGTAATACACAACGTTTCGGTGTTCCATTGGGATATGGCGGTCCCCA 2819 Query 153806 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 153865 |||||| ||| | || || || || ||| | ||||||| || || |||||||||| Sbjct 2820 TGCTGCGTTCATGGCCACTACTGATAAGCTGGTGCGAAAGATGCCGGGGCGAATTGTAGG 2879 Query 153866 TCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTA-GAGAGC 153924 ||| ||||| | || || ||| || | || || || || | || | |||| Sbjct 2880 AATGTCTAAGGATAGACATGGAAACCCAGCGTATCGCTTGGCCCTGCA-AGTACGTGAGC 2938 Query 153925 AGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGG 153972 |||| ||| | | || || || || ||||||||||| || |||| Sbjct 2939 AGCACATCCGCCGCGAGAAGGCCACATCGAACATCTGCACCGCACAGG 2986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578890721482400