Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq43298 91.5 2e-13 >seq43298 Length=7455 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT 159606 |||||||| || || ||| || | ||||| ||||| ||| || | || ||| Sbjct 4894 ATTATGATCACGTACCCAAGCACGTACGGTGTGTTTGAGGAGGGTATCCGAGACATGTGT 4953 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 | | || ||| || | || || ||||||||||| || ||||| || | || || || Sbjct 4954 GACCTGGTGCATCAGCACGGGGGCCAGGTATATCTGGACGGTGCTAACATGAACGCGCAA 5013 Query 159667 GTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726 || ||| | ||| | ||||||||| | ||||||| || | ||| | || ||| Sbjct 5014 GTGGGTTTGTGTCGCCCAGGAGACTATGGTTCGGATGTATCGCACTTCAACCTGCACAAG 5073 Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 || |||||||| ||||| || ||||| || ||||| | || || ||||| || Sbjct 5074 ACCTTCTGTATCCCACACGGTGGTGGTGGACCTGGAATGGGACCCATTGGCGT 5126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587724206779600