Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq27769 123 2e-23 seq37552 120 2e-22 >seq27769 Length=1647 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101242 TCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGC 101301 ||| |||||||| | |||||||| || | || || || ||||| || || ||||| || Sbjct 550 TCCGCCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTATAATCAGC 609 Query 101302 GATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGG 101361 | ||| | | | || || ||||| |||||||| || || | ||||| ||||| || || Sbjct 610 CAAAGTACGGCCGTCCTCTAATTGTTTACCTGCGAAGATTAGTCGCTGCTGATCTGGTGG 669 Query 101362 AATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 |||||||| |||||||| ||||| ||| ||| | |||| ||| ||| | || || Sbjct 670 TATGCCTTCCTTATCTTGTATTTTAACTTTCACATTATCTATAGTATCACTAGACTCGAC 729 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| || || || || | || || || ||||||||||| Sbjct 730 ATCCAACGTGATAGTCTTACCAGTGAGCGTCTTGACGAATATCTGCAT 777 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| ||||||||||| | |||||| || || ||||| |||||||| || || || Sbjct 779 CCACCTCGCAAACGTAAAACGAGATGAAGAGTTGACTCTTTCTGTATATTATAGTCAGCA 838 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| || | || ||||| ||||| |||| ||||| |||||||| || Sbjct 839 AGTGTGCGGCCATCTTCAAGCTGTTTACCAGCAAAGATCAGTCGCTGCTGATCGGGGGGG 898 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || ||| | || | || ||| | ||||| Sbjct 899 ATTCCTTCCTTGTCTTGTATCTTGGCCTTCACATTATCAATCGTATCACTGGACTCCACA 958 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTT 101473 || || |||| || || || |||| || || ||||| || |||||| || Sbjct 959 TCGAGGGTGATAGTCTTTCCAGTTAGTGTCTTCACAAAAATTTGCATGTTT 1009 >seq37552 Length=3269 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 101239 ATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATC 101298 ||| ||||| | | ||| || || | ||||| ||||| || || || || |||||||| Sbjct 3016 ATTACCTCCGCGGAGACGCAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAATC 3075 Query 101299 GGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGG 101358 ||| | || | |||| |||| |||||| || || || ||||||||||| ||||| || Sbjct 3076 GGCCAGGGTACGTCCATCTTCCAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGG 3135 Query 101359 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTC 101418 || ||||| || ||||| ||||| || || ||| | || | || ||| || ||| Sbjct 3136 GGGGATGCCCTCCTTATCCTGAATCTTAGCCTTCACATTATCGATGGTATCACTCGATTC 3195 Query 101419 CACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | |||| || || || || | ||| || ||||| |||||||| Sbjct 3196 GACATCCAAGGTGATTGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 3246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396063553331145