Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq44045 201 2e-46 seq39701 156 8e-33 >seq44045 Length=9771 Score = 201 bits (222), Expect = 2e-46 Identities = 810/1255 (65%), Gaps = 48/1255 (4%) Strand=Plus/Minus Query 212894 CTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAA 212953 ||| | ||| || ||||||| |||||||| || ||||||||||| | | ||| | Sbjct 2896 CTTCAGCAGATGCTGGTTGACAATCTGGAACTCTCCTGAGAGCACACGACGTGTGTAGAT 2837 Query 212954 GTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGT 213013 ||| || ||||||||||| ||||||||||| || ||||||||||| || ||||| || || Sbjct 2836 GTTCGATGTGTAGGGCTCTATGCTCTCGTTATTACCCAGAATCTGAGCTGTGCTAGCGGT 2777 Query 213014 GGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC-GAA 213072 ||||| || || |||| || || || | ||||| | || | | || | Sbjct 2776 AGGCATAGGGGCGACCAAAAGTGAATTTCTGAGTCCGTATAAAGCCAT-ATCCTCCTTGA 2718 Query 213073 GCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACT 213132 || ||||| || ||| | || || | || | |||||| || |||| Sbjct 2717 CCTTAGCCCAATCGTGTCTATCCGAGGGGAC---------AACATCCCACATATCGAACT 2667 Query 213133 GCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGG 213192 ||||||| || |||||| | ||| || ||| | ||| || || | | ||||| Sbjct 2666 GCAAGATACCCTTGCTCGCTGGGGAACCAGCGTAGGTCTCGTAAGGACCCTCCCTCTTGG 2607 Query 213193 CCAGCTCGCAGGA--CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTT 213250 | | ||||| | | || || ||| ||||||||| || || || || | | |||| Sbjct 2606 CAA--TCGCAATACTCTCCGTCACCGCACTGTAGTAGATAGTCTCGAAGATGTGCTTGTT 2549 Query 213251 GAGCTTCTTGGCCTCTGGGGACGTGAAGGGCA---TCATCATGCGTTGGAACACATCAGC 213307 ||| || || ||| ||| |||| ||||| | |||| | || || Sbjct 2548 CAGCACGCGTGCATCGGGGCTATCGAATGGCAGGCGCATCAAG---ATGAACGCGTCTGC 2492 Query 213308 CAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTT-GGAGCACTCCT 213366 || || || || || | ||||| |||| ||| | | |||| ||| ||| || Sbjct 2491 AAGGCCTTGTACACCTAGACCGATAGGTCGGTGGCGCTTGTTACTCTTCTCAGC-TTCAG 2433 Query 213367 CCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGA 213426 || |||||| ||||| ||||||||| ||||| || ||||| ||||| | | |||||| Sbjct 2432 GCACAGGGTAATAGTTGACGTCGATGATTTTGTTTAGATTGCGCGTGGCTATTCTGGTGA 2373 Query 213427 CATGGGCCAGGTACTCGTGATTGAACACGTAGC------CCCCGTC---CTGCACAAACT 213477 | | | || | | | | |||| || || | ||||| || || ||| Sbjct 2372 CCTCCTCGAGCTTCACAAAGTCGAACTCGGGGCCGTTTGCTCCGTCGGTCTTGACGTACT 2313 Query 213478 CAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCA 213537 ||||||||| | | || || || || || ||||| || | | | | |||||| | Sbjct 2312 TAGGCAGGGCCAGGGACGCAAGATTACACACAGCCACTTCGTCGGGGGAAGAGTACTCGA 2253 Query 213538 TGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACT-TT 213596 |||||| |||||| || ||| ||||||||||| ||||| ||||| ||| || Sbjct 2252 CGATCTCACAGCACAGATTAGAGCACTTGATGGTGCCCAAATTCTGCTGGTT--ACTCTT 2195 Query 213597 GCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAG 213655 ||| | ||| | ||||||||| |||||||| || | |||||||| ||| | | | || Sbjct 2194 GCGGTTGCACGCATCCTTGTACAGCATGTATGGTGTGCCGGTCTCGGTCTGCGCCTCTAG 2135 Query 213656 TATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CT 213714 || | ||| || | | ||||||| || ||| | |||| | | | || || Sbjct 2134 AATGGCGAACCACAGCTGCTGTGCCTTGATTACTCGCTT---AGCT-CTACCCTCGCGCT 2079 Query 213715 CGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGG-ACAG 213773 |||||| | ||| || || | || || | |||||||| ||||| || || || Sbjct 2078 CGTACTTGTGGTATAGATCTTCAAACTCCTTTCCCCAGACATCGTCCAAGCCTGGTGCAT 2019 Query 213774 GATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCC 213833 | || | | || ||||| || ||||| || | | | ||| || || || Sbjct 2018 CA-CTTGGTGAGAACAGACTCCACTCTCCGTCGGCTTCGCACCGTTCCATAAATAGATCG 1960 Query 213834 GGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTG 213893 || |||||| || ||| || || | | | | |||| || || | ||| || Sbjct 1959 TTGATCCACAGGCCGAAGAAAAGATCACGTGCGCGCATCTCCTCTGAACCTGTGTTCTTC 1900 Query 213894 CGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCG 213953 ||||| || || |||||||| || |||||||| ||||| | ||| || ||||| || Sbjct 1899 TTTAGATCCAGGAACTCAAAGATATCTGCGTGCCAGGGCTCTAGGTACATTGCAAATGCT 1840 Query 213954 CCCGGCCTCTTG---CCGCCCTGGTCCAC-CAGCCTGGCCACCATGTTGAAGATGCGCAG 214009 || || | |||| || || ||||| || ||| | || ||||||| | ||||| Sbjct 1839 CCAGGACGCTTGTTACCACCTTGGTCAACGTAGCGT-GCGGTGTTGTTGAATACACGCAG 1781 Query 214010 GACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCT 214069 | || || || ||||| || | ||| |||||||| || || || | || || Sbjct 1780 CATAGGCACAAGTCCGTTAGAGTTTCCATTGGTTCCAGCGATGTAGCTTTCTTTGGATCT 1721 Query 214070 CAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAG 214124 | ||| | | ||| || || || ||||| |||||||||||| |||||| Sbjct 1720 GATCTTGTGAACGTTGAGTCCGATACCTCCGGCACTCTTGGAGATCATCGCGCAG 1666 >seq39701 Length=4095 Score = 156 bits (172), Expect = 8e-33 Identities = 420/639 (66%), Gaps = 15/639 (2%) Strand=Plus/Minus Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || ||| | || || ||| |||||||||| | |||| || || ||||| || || Sbjct 2947 AGAAGGCGGTCGGCCACGAACTCGATGTACTGGCACATAAGCTTGTGATTCATTCCAATT 2888 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 || | |||||| | || | || || || || | ||| |||| || || || | | Sbjct 2887 AGAGCCACGGGAAGGGCATCCGTCAGGAATTCTTGCTCGATCTTAACAGCATCTACAATG 2828 Query 48074 ATCTGCTTAACG----CGGGACTCTGAGGGTTT--GTTGCGCAGGTGCTTGGCATAGAGC 48127 || ||| ||| ||| || |||||| ||| | ||||| | | | ||| Sbjct 2827 ATACTCTTCACGACTTCGGCGCT----GGGTTTACGTTCC--AGGTGGTCG---TGTAGC 2777 Query 48128 ATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAG 48187 | || |||||||| | ||| | || || || | |||||| | | | |||||||| Sbjct 2776 AGACAAGCAAAGTCACAGTGGAGTCCCTCATCTCTGCTGATCAACTCATTGGAGAAAGTT 2717 Query 48188 AGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAG 48247 || |||||||| | ||| | || || | ||| || || | || || ||||||||||| Sbjct 2716 AGTCCAGGCATTAGCCCACGCTTCTTCATCCAAAAGATCGAGGCAAAGGAGCCAGAGAAA 2657 Query 48248 AAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCT 48307 ||||| ||||| ||||| ||||| || | | ||| |||||| | | | ||| Sbjct 2656 AAGATACCCTCTACTGCAGCGAAGGCTACCACACGCTCACCGAAACTGGAGGCATCGTCG 2597 Query 48308 GAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCC 48367 |||||| || |||||||| ||||| ||||||| | || | ||||| || || Sbjct 2596 TTGATCCACTTGAGGGCCCAGTCGGCCTTTTTCTTGACGGCAGGGAGTGTCTCAATAGCG 2537 Query 48368 CGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTAC 48427 || || || | ||||| | ||| | || || || ||| | | |||| Sbjct 2536 TTAAATAGGTTATCCTTCTCACGGGGGTCACGGATGTATGTCTCGATAAGCGTGGAGTAC 2477 Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487 ||||||||||| | ||||| || ||||||||||| ||||||||| | ||||| Sbjct 2476 ATCTCAGAGTGGATGTTCTCAATGGCGATCTGGAATCCGTAGAAGCAACGTGCCTCGGCG 2417 Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547 | || ||||| | ||| | ||| || |||||||| || || || ||||| ||| Sbjct 2416 ATTTGTACTTCACCGCTGAAGCGCTCGAGGAGATTCTCGTTCACAATACCATCACTGGCA 2357 Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCG 48586 || ||||| || | ||||| | ||| ||||||||| Sbjct 2356 GCGAAGAAAGCCAACACATGGGATAAGAAGTGGCGCTCG 2318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931014809542400