Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11]
44,485 sequences; 85,494,527 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq43298 86.0 7e-12
>seq43298
Length=7455
Score = 86.0 bits (94), Expect = 7e-12
Identities = 154/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376
||||| ||||||||||| || || || || | | || |||||||| | |||
Sbjct 2984 TGTGCGGTGCAGATGTTCGATGTGGCCTTCTCGCGGCGGATGTGCTGCTCACGTACTTGC 2925
Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCA 139436
|| || || | || || || || || | || ||| ||| |||||||||| ||
Sbjct 2924 AGGGCCAAGCGATACGCTGGGTTTCCATGTCTATCCTTAGACATTCCTACAATTCGCCCC 2865
Query 139437 GGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTAT 139496
|| ||||||| | ||| || || || || | ||| |||||||| ||||| || |||
Sbjct 2864 GGCATCTTTCGCACCAGCTTATCAGTAGTGGCCATGAACGCAGCATGGGGACCGCCATAT 2805
Query 139497 CCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCA 139541
|||| |||| ||| || | ||| || ||||||| | ||||||
Sbjct 2804 CCCAATGGAACACCGAAACGTTGTGTATTACCTACCACTATATCA 2760
Score = 82.4 bits (90), Expect = 9e-11
Identities = 158/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|| ||||| || || | ||||| || ||||| || ||||| |||||||| ||||| ||
Sbjct 5126 ACGCCAATGGGTCCCATTCCAGGTCCACCACCACCGTGTGGGATACAGAAGGTCTTGTGC 5067
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| || | || ||||||| | ||||||||| | ||| | ||| || || ||
Sbjct 5066 AGGTTGAAGTGCGATACATCCGAACCATAGTCTCCTGGGCGACACAAACCCACTTGCGCG 5007
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | || ||||| || ||||||||||| || || | | ||| || | | ||| ||
Sbjct 5006 TTCATGTTAGCACCGTCCAGATATACCTGGCCCCCGTGCTGATGCACCAGGTCACACATG 4947
Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415
| || ||| ||||| ||||| | || ||| || || ||||||||
Sbjct 4946 TCTCGGATACCCTCCTCAAACACACCGTACGTGCTTGGGTACGTGATCATAAT 4894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578676440702200
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |