Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq44045 159 4e-34 >seq44045 Length=9771 Score = 159 bits (176), Expect = 4e-34 Identities = 569/879 (65%), Gaps = 23/879 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| | ||||| || | || ||||| || || ||||| ||| | Sbjct 1454 CCTCAGCACATGCTTATGCGTGTGAGTGTGGGTATCCATGGCGACGACATCGATGGGGCT 1513 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 | || |||||| |||| | || || ||| ||| | ||||| |||| ||||| ||| Sbjct 1514 ATTGAAACATACAACAACCTATCACAGGGTTGGTTTACACACGCTTCACCTACCCTGTTC 1573 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || || || ||| | | || ||| | || || |||||| || | | | |||| ||| Sbjct 1574 AACGCCGGCACAAGACGTCCCCAGCTATCATCGTGTTTCCTTCTCACAATCGAGGACGAC 1633 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || || | |||||||| || || | | || ||| ||||| ||| | || || Sbjct 1634 TCCATTGAAGGTATCTACAACACCCTGAAGACCTGCGCGATGATCTCCAAGAGTGCCGGA 1693 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAAT-AAATCTCGTATTCGGGGGACAAA 75510 ||||| || | || | || | | ||| |||| ||| || || || || || Sbjct 1694 GGTATCGGACTCAACGTTCACAAGATCAGATCCAAAGAAAGCTAC-ATCGCTGGAACCAA 1752 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 ||| | || | || || | || ||||| || ||||| ||| ||| || ||||| || Sbjct 1753 TGGAAACTCTAACGGACTTGTGCCTATGCTGCGTGTATTCAACAACACCGCACGCTACGT 1812 Query 75571 AAATCAAGCGGGGCGTCGCAAGGGGTC-----CATC-GCGGTCTACTTGGAACCATGGCA 75624 | |||| || | |||| | | ||| || | ||| | || || ||||| Sbjct 1813 TGACCAAGGTGG---TAACAAGCGTCCTGGAGCATTTGCAATGTACCTAGAGCCCTGGCA 1869 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || |||||| | |||||||| || || ||| |||| || ||| || Sbjct 1870 CGCAGATATCTTTGAGTTCCTGGATCTAAAGAAGAACACAGGTTCAGAGGAGATGCGCGC 1929 Query 75685 TAGAGATCTCTTTTCATC--CCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | ||||| |||| || ||||||||| || || || ||| | ||| || | Sbjct 1930 ACGTGATCT--TTTCTTCGGCCTGTGGATCAACGATCTATTTATGGAACGGTGCGAAGCC 1987 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT---G 75799 | || | ||| ||| |||| ||| | |||||||| || |||| || | Sbjct 1988 GACGGAGAGTGGAGTCTGTTCTCACCAAGTGATGCACCAGG---CTTGGACGATGTCTGG 2044 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT 75859 || |||||||||||| || ||| ||||| || ||||||||||| || |||| | Sbjct 2045 GGAAAGGAGTTTGAAGATCTATACCACAAGTACGAGCGCGAGGGTAGAGCTAA-GCGAGT 2103 Query 75860 GTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918 | || | | | | | ||| || ||||| | | ||||| ||||| || ||||| Sbjct 2104 AATCAAGGCACAGCAGCTGTGGTTCGCCATTCTAGAGGCGCAGACCGAGACCGGCACACC 2163 Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978 ||| ||||| ||||||||||| || ||| ||||||||||| |||||||||| || || Sbjct 2164 ATACATGCTGTACAAGGATGCGTGCAACCGCAAGAGTAACCAGCAGAATTTGGGCACCAT 2223 Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038 |||| |||| ||||| ||| || || | |||||| | || || |||||| Sbjct 2224 CAAGTGCTCTAATCTGTGCTGTGAGATCGTCGAGTACTCTTCCCCCGACGAAGTGGCTGT 2283 Query 76039 TTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAA 76077 || ||| | || || | ||||| || ||||| ||||| Sbjct 2284 GTGTAATCTTGCGTCCCTGGCCCTGCCTAAGTACGTCAA 2322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596237870016800