Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq27769 114 2e-20 >seq27769 Length=1647 Score = 114 bits (126), Expect = 2e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| ||||| | || || | ||||| || ||||| || || || ||||| | | Sbjct 777 ATGCAGATATTCGTCAAGACGCTCACTGGTAAGACTATCACGTTGGATGTCGAGTCTAGT 718 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || |||||| ||||||||||||||| ||||||||||| ||||| || Sbjct 717 GATACTATAGATAATGTGAAAGTTAAAATACAAGATAAGGAAGGCATACCACCAGATCAG 658 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | || ||||| || | || || | | ||||| | |||||||| Sbjct 657 CAGCGACTAATCTTCGCAGGTAAACAATTAGAGGACGGCCGTACTTTGGCTGATTATAAC 598 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || ||||| ||| | || | || ||||| || |||||||||||||| Sbjct 597 AT--CCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTAAGAGGCGG 551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731465033426000