Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq41479 114 1e-20 >seq41479 Length=5205 Score = 114 bits (126), Expect = 1e-20 Identities = 209/298 (70%), Gaps = 10/298 (3%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 ||||| ||||| || || || ||||| | |||| |||| ||| || ||||||| Sbjct 4272 TCAGTTTCCGGATTATCGCACGATGGACAGAGCACATACTTCTTGATAAACTTATCAAGC 4331 Query 34378 AGGTCCTGTAACT-TAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTA 34436 |||||||| |||| | || | || | || ||||| ||| | ||| | || Sbjct 4332 AGGTCCTGCAACTCTTTCGCA-TCATACTTTCCATTGACAATGTACTTTTCATGCTTCGC 4390 Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAA-ATGGCCG 34495 ||| | || || || | || ||||| || ||||| ||||||| ||||| |||| | Sbjct 4391 ATCCATATGAGTCTGTGAACCGAGCTCACAACCGAACCACTTTGTTGGGTAGGATGGA-G 4449 Query 34496 GACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGC 34555 | | |||||| ||||| | || ||| ||| ||| | || || ||||| || ||||| | Sbjct 4450 GTCTTCCAAGAGCCTTTCCAATGTCGCTCATATTGGCAATAACGGTCTTAATACCGTTAC 4509 Query 34556 CCTTTCCTTCGACCTTGGCGCAGATGCGC---GGCATTTTGTAGCGGTAGAACGCGTC 34610 |||| ||||||||||| |||| ||| || ||||| ||||| |||||||| || || Sbjct 4510 CCTTGCCTTCGACCTT--CGCA-ATGAGCTTGGGCATCTTGTACCGGTAGAAGGCATC 4564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412617773411105