Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq37552 125 5e-24 seq27769 100 2e-16 seq37601 96.9 2e-15 seq753 95.1 8e-15 >seq37552 Length=3269 Score = 125 bits (138), Expect = 5e-24 Identities = 157/213 (74%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| || ||||||||||||||| || || | ||| | || |||| ||| Sbjct 3038 ACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCGGCCAGGGTACGTCCATCTTCC 3097 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 ||||||||||| |||||||||| || ||||| || | || | |||||||| || | Sbjct 3098 AGTTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGGGGGATGCCCTCCTTATCCTGA 3157 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGT 34944 || || || || || ||||||| ||| | | |||||||| | ||| || || Sbjct 3158 ATCTTAGCCTTCAC--AT--TATCGATGGTATCACTCGATTCGACATCCAAGGTGATTGT 3213 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| ||||| ||||| |||||||||||||| Sbjct 3214 CTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 3246 >seq27769 Length=1647 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||| || |||||||| | || |||| |||| || || || || || || || Sbjct 814 CTCTTTCTGTATATTATAGTCAGCAAGTGTGCGGCCATCTTCAAGCTGTTTACCAGCAAA 873 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||||||| ||||| || | || | || |||||||| | ||| || || || Sbjct 874 GATCAGTCGCTGCTGATCGGGGGGGATTCCTTCCTTGTCTTGTATCTTGGCCTTCACATT 933 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| ||| ||| ||| ||||| | ||| || |||||||| || || ||||| || Sbjct 934 ATCAATCGTATCACTGGACTCCACATCGAGGGTGATAGTCTTTCCAGTTAGTGTCTTCAC 993 Query 34966 AAAGATCTGCATG 34978 ||| || |||||| Sbjct 994 AAAAATTTGCATG 1006 >seq37601 Length=3285 Score = 96.9 bits (106), Expect = 2e-15 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| |||| ||||||||| ||||||||||| | ||| |||| |||| Sbjct 2423 AGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGCTAGTGTGCGTCCATCT 2364 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||||| ||||| ||||||||||| || || ||||| || Sbjct 2363 TCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGATC 2326 >seq753 Length=412 Score = 95.1 bits (104), Expect = 8e-15 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||| || ||||| | ||| | || |||| |||| |||||||| || || Sbjct 198 CTCCTTCTGAATATTGTAGTCGGCTAGTGTACGTCCATCTTCCAACTGCTTTCCAGCAAA 257 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || | || ||||| || | || | |||||||| || | ||||| || || | Sbjct 258 AATTAAACGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATTTTAGCCTTCAC--A 315 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | ||||||| || | | || ||||| | ||| || |||||||| ||||| |||| Sbjct 316 T--TATCGATAGTATCGCTAGATTCAACATCCAGGGTGATTGTCTTTCCAGTGAGAGTCT 373 Query 34962 TTACAAAGATCTGCAT 34977 | |||||||||||||| Sbjct 374 TGACAAAGATCTGCAT 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325516222086215