Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11]
44,485 sequences; 85,494,527 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq27769 132 8e-26
>seq27769
Length=1647
Score = 132 bits (146), Expect = 8e-26
Identities = 165/226 (73%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| |||||| | || || | || || || || || || | ||||| || || |
Sbjct 776 TGCAGATATTCGTCAAGACGCTCACTGGTAAGACTATCACGTTGGATGTCGAGTCTAGTG 717
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
||||||| | ||||| ||| |||||||||| ||| |||||||| ||||| ||||| |
Sbjct 716 ATACTATAGATAATGTGAAAGTTAAAATACAAGATAAGGAAGGCATACCACCAGATCAGC 657
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| |||| || || ||||||||||||||||| || | || || | |||||||| |
Sbjct 656 AGCGACTAATCTTCGCAGGTAAACAATTAGAGGACGGCCGTACTTTGGCTGATTATAACA 597
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||| || || ||| | || ||||| || |||||||||| ||
Sbjct 596 TCCAAAAGGAGTCCACTTTGCACTTAGTTTTGAGATTAAGAGGCGG 551
Score = 100 bits (110), Expect = 4e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || ||| |||| ||||| || || || | ||||| || | |
Sbjct 1004 TGCAAATTTTTGTGAAGACACTAACTGGAAAGACTATCACCCTCGATGTGGAGTCCAGTG 945
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| | ||||| || || |||||| || ||||| || || |||||||| |
Sbjct 944 ATACGATTGATAATGTGAAGGCCAAGATACAAGACAAGGAAGGAATCCCCCCCGATCAGC 885
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| |||| || ||||| |||||||| | || ||| | || | | || |||||||
Sbjct 884 AGCGACTGATCTTTGCTGGTAAACAGCTTGAAGATGGCCGCACACTTGCTGACTATAATA 825
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
|||| ||||| || ||| | ||| | || ||||| || |||| ||||
Sbjct 824 TACAGAAAGAGTCAACTCTTCATCTCGTTTTACGTTTGCGAGGTGGTA 777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 785729242346200
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |