Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq42503 250 2e-60 seq43407 145 6e-29 seq36005 111 1e-18 seq37929 98.7 7e-15 seq43121 89.7 4e-12 >seq42503 Length=6233 Score = 250 bits (276), Expect = 2e-60 Identities = 954/1482 (64%), Gaps = 38/1482 (3%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 ||||| ||| | ||| || || |||||||| ||||| | |||||| || ||||| || Sbjct 1949 TTATCTTGGGCGGACACGTTGAGTATACCATTCGCATCGATATCAAAGGTAACTTCGATC 2008 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 || || ||||| ||||||| | || || | | || ||| | ||||| || | Sbjct 2009 TGGGGTGTTCCTCTGGGAGCAGGGGTAATGCCGACAAGATCAAAGGCGCCCAGCTTGTGG 2068 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 || ||||| || | ||| ||||||||| | | || || | || | | ||||| Sbjct 2069 TTGTCTTTCGTCATGGCTCGCTCACCCTCGTACACCTGAATGGACACAGCTGGCTGATTG 2128 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTC----TAT 281651 || | |||||| | || |||| ||| || ||||| || ||||| | ||| Sbjct 2129 TCAGCATAAGTGGAGAAGG-TCTGTGTTTGCTTTGTGGGAATGGTGGTGTTGCGCTTTAT 2187 Query 281652 CAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACAT 281711 || | | |||||| | |||||| || || || | ||| | || | |||| ||||| Sbjct 2188 CAGTGA----GGTCATCACACCACCGGCGGTCTCAATACCCATTGACAACGGAGCGACAT 2243 Query 281712 CAACTAGGACAATATTTT-GA---AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCT 281767 | | || | || || | || || | | | || | ||| ||||| || | Sbjct 2244 CCAAAAGCAAAAGATCTGAGACTGAGCTGTGC----GTGTCACCCCTGAGAATGGCACCC 2299 Query 281768 TGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTA 281827 |||| || || |||||||| || |||||||| ||| | | | || || | |||| Sbjct 2300 TGAACTGCGGCGCCATATGCGACTGCTTCATCTACATTGATGCTCTTGTTCAGCTCTTTA 2359 Query 281828 CCATTGAAAAAATTTGAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAAC 281886 |||||||| | | ||||| | | ||| | ||| |||||||||| || || || || Sbjct 2360 CCATTGAAGCACTCAGAAAGTAACT-TCTGAATCTTCGGAATACGAGTAGAACCACCTAC 2418 Query 281887 TAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC 281946 | ||||| |||| | || || |||| ||| | ||| |||| |||| || || Sbjct 2419 CAGCACAATCTCATCGATACTCGACTTGTCCATTTTCGCATCTCGTAAAGCTTTCTCCAC 2478 Query 281947 GGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG 282006 ||||| || | | || | || | ||| | |||||| ||| ||||| ||| | Sbjct 2479 TGGTTCTAGTGTGCCGCGGAAAAGATCGGCACACATTTCTTCAAATCGAGCTCGAGTGAT 2538 Query 282007 ---AGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGT 282063 |||| | |||| | || ||||| | |||||| | ||| | | | || | Sbjct 2539 GCTAGTG---TAGAAATCGGTACCCTCGAAAAGAGAATCGATTTCTACATTGGCCTGCGC 2595 Query 282064 CGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT 282123 ||||| || | | ||||||||| || ||||| || | | ||| || | || || Sbjct 2596 AGAAGACGACAACGTACGTTTAGCCTTCTCGCATGCCGTTCGCAATCTACGCATCGCCTT 2655 Query 282124 TGCTGATTG-ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTA 282182 ||| | ||| | ||| ||| | || | ||| | || ||| || | | | | | Sbjct 2656 TGC-GTTTGTAGTCAGATCCTTCTTGTTTTTACGCTGGAACTCCTTCGCGAAATGGGCAA 2714 Query 282183 CAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTT 282242 | | ||| || |||||||| || |||||||| | || | || | ||||| | || | Sbjct 2715 CCATACGGTTGTCAAAATCCTCGCCTCCCAAGTGTGTGTCGCCAGCGGTAGCCTTGACCT 2774 Query 282243 GGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAA 282302 ||| | || | || || | | | | |||| ||| || || ||||| | ||| | Sbjct 2775 CGAATATGCCTTGATCCAGGGTGAGTATACTAACGTCAAATGTGCCTCCACCAAGATCGA 2834 Query 282303 AAATAAGTACATTCATTTCTTTGTC-TTGG-----TTTTTATCAAGACCATACGCAAAAG 282356 |||| || | ||| | || || |||| || || || ||||| ||||||| | Sbjct 2835 AAATTAGGATCTTCTTCTCGCCATCGTTGGCGGCCTTCTTGTCCAGACCGTACGCAATCG 2894 Query 282357 CAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCAT 282416 |||| || || || || || || || | | ||||| |||||||| || || |||| Sbjct 2895 CAGCGGCTGTGGGCTCGTTGATTATACGTAGCACATTTAGACCAGCGATAGCCCCAGCAT 2954 Query 282417 CTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTG 282476 | || || ||| ||||||||||| || |||||||| || || || || ||||| |||| Sbjct 2955 CCTTTGTACTTTGCCTTTGTGAATCATTGAAATATGCTGGCACCGTGATCACGGCGTCTG 3014 Query 282477 TTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATG 282536 | |||| |||| | |||||| ||| |||| ||||||||| | | | ||| || | Sbjct 3015 TCACTTTAGTTCCCAAATAAGCCTCTGCCGTTTCTTTCATTTTGGTCAGCACCATAGACG 3074 Query 282537 AAATTTGTTCTGG--AGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGG 282594 | || | || || ||||||| ||| |||| || |||| | | ||| Sbjct 3075 ATATCTCCTCAGGTAAGAATAT--CTTCTTTTCAGCCATGTACTCCACTTGTACAGCTGG 3132 Query 282595 TTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG 282654 || ||| | | ||||| |||| | | |||| ||||| || || || Sbjct 3133 CTTCTTATTTTGTTCCACAACTTCGAATGAGAAGTGCTTCACATCTGCCTGCACTTCTTT 3192 Query 282655 GTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAAC 282714 ||||||||| | || || || | || || ||||| || | || ||| || |||| Sbjct 3193 GTCATTAAACTTTCGGCCTATCAGACGCTTAGCATCGAACACGGTGTTGTGCGGGTTAAG 3252 Query 282715 TGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATA 282774 || ||||| || ||||| ||||| | || | || | ||||| || | ||| || Sbjct 3253 AGCGATTTGATTCTTAGCTGCGTCTCCTAATAGTCGCTCAGAGTCTGTGAAAGCAACGTA 3312 Query 282775 TGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCA 282834 || || ||||| || || ||||||||||| || || || ||||| || |||| || | Sbjct 3313 CGAGGGCGTTGTTCGGTTGCCTTGATCATTGGCGATGATCTCAACCTTGCCATGCTGGAA 3372 Query 282835 TACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 282876 |||||| || || |||| || || | ||| || ||||| Sbjct 3373 TACACCAACGCATGAGTAAGTGGTACCGAGATCGATTCCAAT 3414 >seq43407 Length=7713 Score = 145 bits (160), Expect = 6e-29 Identities = 901/1435 (63%), Gaps = 20/1435 (1%) Strand=Plus/Minus Query 281425 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 281484 ||||| ||||||||| |||||||| ||||| | |||||| ||||| ||||| || || Sbjct 5849 GGCAGACACATTAAGGATACCATTAGCATCGATATCAAAGGTGACCTCAATCTGGGGTGT 5790 Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544 ||||| ||||||| | || || | | ||| | |||| || | || || || Sbjct 5789 TCCTCTGGGAGCAGGGGCAATACCAGTAAGGTCAAAGGCACCCAACTTGTGGTTGTCCTT 5730 Query 281545 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 281604 || | ||||||||||||| ||| || |||| || | | |||||| || | || Sbjct 5729 TGTCATGGCTCGTTCACCCTCGTAAACCTGAATAGACACCGCTGGTTGATTGTCAGCGTA 5670 Query 281605 AGTTGTAAATACTCTGGATTTTTTACAAGGA-ATTGTTGTGTTTCTATCAATAATATTGG 281663 || | ||| |||| | | | | || || || ||||| | | || | | Sbjct 5669 TGTGGAAAAGG-TCTGTGTCTGCTTCGTGGGGATGGTGGTGTTGCGCTTGATTAAGGAAG 5611 Query 281664 TCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 281723 |||| | ||||| || || |||| ||| | ||| || || | || || | ||| | | Sbjct 5610 TCATCACTCCACCGGCAGTCTCTATACCCATAGATAGGGGTGCCACGTCCAGTAGTAGCA 5551 Query 281724 TATTT-TGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 || ||| | | || || | || ||||| ||| |||| | ||| || ||| Sbjct 5550 GATCGCTGACGGCGCTG-TCTGTGTCGCCTCTCAGAATGGCTCCTTGGACAGCCGCTCCA 5492 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 281842 || || || || ||||| || | | | || || | ||| || ||||| ||| Sbjct 5491 TAGGCTACGGCCTCATCCACGTTGATGCTCTTGTTCAGCTCTTTGCCGTTGAAGTAATCA 5432 Query 281843 GAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 281901 || | |||| ||| | ||| |||||||| | || || ||||| | ||| ||||||| Sbjct 5431 GACAATAGTT-TCTGAATCTTTGGAATACGGGTGGAACCGCCAACCAGTACGATTTCATC 5373 Query 281902 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGC 281961 | ||| || || | |||| ||| || | ||||| || ||||| || | Sbjct 5372 GATACTTGACTTGTCAAACTTTGCATCTCGCAATGCCTTTTCTACTGGTTCCAGTGTGCC 5313 Query 281962 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 282021 ||| ||||||||| ||| | || ||||| || | || | || | |||| Sbjct 5312 TCTGAACAAGTCTACACACATCTCCTCGAAACGTGCGCGTGTGATGGTTGTGTAGAAATC 5253 Query 282022 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 282081 | || ||||| | ||| || | |||| | | || | || || || || | ||| Sbjct 5252 AGCGCCCTCGAAAAGAGAGTCGATCTCAACATTGGCCTGCGCGGACGACGAAAGCGTACG 5193 Query 282082 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATC 282141 ||| || || || || || || | || || | ||| || |||| | | ||| Sbjct 5192 TTTCGCCTTCTCGCACGCCGTTCTCAACCTACGCATAGCTCGCGCGTTTTGAGTTAGATC 5133 Query 282142 TGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATC 282201 | || || | | ||| || | | | | ||| | | || || ||||| Sbjct 5132 CTTCTTGGTCTTACGTTGGAACTCCTTGGCGAAATGAGCTACCAATCTGTTGTCGAAATC 5073 Query 282202 TTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAG 282261 |||||||||||| | || | || | |||| | | |||| ||| | || || || | Sbjct 5072 TTCACCTCCCAAGTGTGTGTCACCAGCAGTAGATTTGACTTCGAACACACCGTCATCGAT 5013 Query 282262 AGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC 282321 || | | | | ||||| ||| || || || | || ||||| || | ||| | || Sbjct 5012 GGAGAGTATACTTACATCGAAGGTACCTCCTCCAAGGTCGAAAATTAGAATTTTCTTCTC 4953 Query 282322 TTTGTC-TTGG-----TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 282375 || |||| || || || | ||||| |||| |||||||| ||||| || || Sbjct 4952 CCCCTCATTGGCGGCCTTCTTGTCCAATCCATAGGCAATCGCAGCAGCCGTTGGCTCGTT 4893 Query 282376 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 282435 || || | | || || ||||| || || || ||||| || || ||| ||||| Sbjct 4892 GATGATACGTAGCACGTTCAGACCTGCGATAGCCCCAGCATCCTTTGTACTTTGCCTTTG 4833 Query 282436 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATA 282495 ||||| || ||||||||||| |||||||| || || || || |||| |||| | || Sbjct 4832 AGAATCATTGAAATATGCAGGCACAGTAATCACAGCGTCGGTCACTTTGGTTCCCAAGTA 4773 Query 282496 AGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--AGAA 282553 ||| || |||| ||||| || | | | |||||| || || | ||| || |||| Sbjct 4772 AGCCTCGGCCGTTTCCTTCATCTTTGTCAGCACCATTGAGGATATCTCTTCAGGCAAGAA 4713 Query 282554 TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA 282613 | | ||| ||| ||| ||| | | ||| || || | | | Sbjct 4712 TGT--CTTCTCTTCGGCCATATACTCTACCTTGATCGCTGGCTTCTTGTTCTTCTCCACA 4655 Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG--GTCATTAAAATCTCTAC 282671 ||||| |||| | | || | |||| || |||| | ||||||||| | || | Sbjct 4654 ACTTTGAATGAGAAGTGCTTTAGATCTTCCTG--TACTTCGCTGTCATTAAACTGTCGGC 4597 Query 282672 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGG 282731 ||||||||||||| ||||| || | || || | || || | || | || | || | Sbjct 4596 CAATTAATCGTTTGGCATCGAATACCGTGTTATTAGGGTTGAGCGCTACCTGGTTCTTCG 4537 Query 282732 CTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 282791 | || ||||| | || | || | || || || | |||||| || || ||||| || | Sbjct 4536 CGGCGTCTCCCAAAAGTCGCTCGGAGTCCGTGAAAGCAACATAAGAGGGCGTTGTACGGT 4477 Query 282792 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 282846 ||||||| || || | || || || || || || | || ||||||| ||||| Sbjct 4476 TACCTTGGTCGTTGGAGATGATCTCTACCTTTCCGTGCTGGAATACACCGACACA 4422 >seq36005 Length=2846 Score = 111 bits (122), Expect = 1e-18 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402 ||| || |||| |||||| || || || ||||||||||| | || ||||| || ||||| Sbjct 1379 ACCGTATGCAATAGCAGCGGCCGTGGGCTCATTAATAATACGCACCACATTCAGTCCAGC 1320 Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 || || ||||||||||| ||||| | |||| || || ||||| ||||| || || Sbjct 1319 GATGGCGCCGGCATCTTTAGTAGCTTGCTTCTGTGCGTCATTGAAATAAGCAGGTACTGT 1260 Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCAT 282516 |||||||| | | | |||||||| || | ||| | ||| |||| |||||| Sbjct 1259 GATAACGGCGTGTTTGACTTCTTTACCTAAATAGGTCTCTGCAGTTTCTTTCAT 1206 >seq37929 Length=3400 Score = 98.7 bits (108), Expect = 7e-15 Identities = 200/296 (68%), Gaps = 6/296 (2%) Strand=Plus/Plus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || ||||| | ||| ||||| ||||| ||||| | ||||| ||| | || || | || Sbjct 1702 ACCAGACGGTCATCGAAATCCTCACCACCCAAGTGAGTATCTCCAGCAGTGGCCTTGACA 1761 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 ||| | ||| | |||| | | |||| ||||| ||| ||||| || | ||| Sbjct 1762 GTGAACACACCACCGTCAATGGTTAGTAGAGACACATCGAAGGTACCACCTCCAAGATCG 1821 Query 282302 AAAATAAGTACATTCATTTC-----TTTG-TCTTGGTTTTTATCAAGACCATACGCAAAA 282355 || ||||| || | || | || || | || ||||||||||| || |||| | Sbjct 1822 AAGATAAGCACGGTGCGCTCACCCTTCTGCTCGTTCTTGTTATCAAGACCGTAGGCAACA 1881 Query 282356 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 282415 ||||| ||||| || || || || || | | ||| | |||||||| || || || Sbjct 1882 GCAGCGGCAGTAGGCTCGTTGATGATACGAAGAACCTCTAGACCAGCGATGGCACCGGCG 1941 Query 282416 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 || || || || || | || |||||||| |||||||| || ||||| || || || Sbjct 1942 TCCTTGGTAGCCTGACGCTGAGAATCGTTGAAATATGCGGGTACAGTGATGACAGC 1997 >seq43121 Length=7161 Score = 89.7 bits (98), Expect = 4e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282655 GTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAAC 282714 ||| ||||| | | ||| || || ||||| ||||||| | ||||| || ||||| | Sbjct 6144 GTCGTTAAACTTCCGACCTATCAAGCGTTTGACATCAAACACCGTATTCGTCGGATTTAG 6203 Query 282715 TGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATA 282774 ||| || | ||||| |||||||| | || | || || || || || | ||| || Sbjct 6204 AGCAATCTGGTTCTTGGCCGCATCTCCTAATAGTCGCTCAGTGTCAGTGAAAGCAACGTA 6263 Query 282775 TGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCA 282834 ||| || || ||||| || ||||||||||| | || || || || |||||| ||| | Sbjct 6264 TGAGGGCGTGGTGCGGTTTCCTTGATCATTGGAGATGATCTCCACCCTACCATGTTGGAA 6323 Query 282835 TACACCTACACA 282846 ||||| || || Sbjct 6324 AACACCAACGCA 6335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3738446374493610