Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq753 114 8e-21 seq37552 107 1e-18 seq27769 104 2e-17 >seq753 Length=412 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || || | |||||||| || || ||| || || || ||||| |||| Sbjct 162 ACCACCACGCAGTCGAAGAACCAAATGCAGTGTTGACTCCTTCTGAATATTGTAGTCGGC 221 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| ||| | || ||||| || ||||| |||||||| |||||||||||||| | || Sbjct 222 TAGTGTACGTCCATCTTCCAACTGCTTTCCAGCAAAAATTAAACGCTGCTGATCAGGAGG 281 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || || || ||||| ||| |||| || | || ||||| ||||| | Sbjct 282 GATACCCTCCTTATCCTGGATTTTAGCCTTC-ACATTATCGATAGTATCGCTAGATTCAA 340 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || ||||||||||||||| Sbjct 341 CATCCAGGGTGATTGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCATA 390 >seq37552 Length=3269 Score = 107 bits (118), Expect = 1e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| ||||| | || ||||| ||| || || ||||||||||||| || || ||| | Sbjct 3031 ACGCAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCGGCCAGGGTACGTCC 3090 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| ||| ||||| || || ||||||||||||||||| | || | || || || Sbjct 3091 ATCTTCCAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGGGGGATGCCCTCCTT 3150 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 || ||| || ||| |||| || | ||| || || ||||| || || | |||| Sbjct 3151 ATCCTGAATCTTAGCCTTC-ACATTATCGATGGTATCACTCGATTCGACATCCAAGGTGA 3209 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || || | || || ||||||||||||||| Sbjct 3210 TTGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCATA 3247 >seq27769 Length=1647 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| ||||||||| || | ||| ||||| |||||| ||||| || || || | Sbjct 778 ACCACCTCGCAAACGTAAAACGAGATGAAGAGTTGACTCTTTCTGTATATTATAGTCAGC 837 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||||| | || || | ||||| || ||||| |||| ||||||||||| | || Sbjct 838 AAGTGTGCGGCCATCTTCAAGCTGTTTACCAGCAAAGATCAGTCGCTGCTGATCGGGGGG 897 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || ||| |||| || | || || || || |||| Sbjct 898 GATTCCTTCCTTGTCTTGTATCTTGGCCTTC-ACATTATCAATCGTATCACTGGACTCCA 956 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || |||| || || ||||| || ||||| Sbjct 957 CATCGAGGGTGATAGTCTTTCCAGTTAGTGTCTTCACAAAAATTTGCAT 1005 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| || | || || || || | |||| ||| ||||| ||||| ||||| | Sbjct 551 CCGCCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTATAATCAGCC 610 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || |||| || |||||||| || || || || | |||||||||||| | || Sbjct 611 AAAGTACGGCCGTCCTCTAATTGTTTACCTGCGAAGATTAGTCGCTGCTGATCTGGTGGT 670 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || ||||| |||| |||| || | || || || || || || Sbjct 671 ATGCCTTCCTTATCTTGTATTTTAACTTTC-ACATTATCTATAGTATCACTAGACTCGAC 729 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | |||||| || ||||| || | ||| || || || ||||||||| Sbjct 730 ATCCAACGTGATAGTCTTACCAGTGAGCGTCTTGACGAATATCTGCATA 778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328525789531200