Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq27769 100 3e-16 >seq27769 Length=1647 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 |||||| || || | | ||||| ||||| ||||| || || || ||||| || Sbjct 565 CAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTATAATCAGCCAAAGTACGGCCGTC 624 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 || | |||||||| | ||||||| ||||| |||||||| ||||||||||| ||||| Sbjct 625 CTCTAATTGTTTACCTGCGAAGATTAGTCGCTGCTGATCTGGTGGTATGCCTTCCTTATC 684 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||||| ||||| | || | |||||| | | ||| || || | ||| | || Sbjct 685 TTGTATTTTAACTTTCACATTATCTATAGTATCACTAGACTCGACATCCAACGTGATAGT 744 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || || | ||| |||||||| Sbjct 745 CTTACCAGTGAGCGTCTTGACGAATATCTGCAT 777 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 ||||| || ||||| | ||| | |||||||||| || || || ||||| | || Sbjct 785 CGCAAACGTAAAACGAGATGAAGAGTTGACTCTTTCTGTATATTATAGTCAGCAAGTGTG 844 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || |||||| ||||||||||| | | |||| || ||||| ||||| || || || ||| Sbjct 845 CGGCCATCTTCAAGCTGTTTACCAGCAAAGATCAGTCGCTGCTGATCGGGGGGGATTCCT 904 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || || || |||| | || | ||||| | | |||||| |||| Sbjct 905 TCCTTGTCTTGTATCTTGGCCTTCACATTATCAATCGTATCACTGGACTCCACATCGAGG 964 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | || || ||||| || || || | ||||| |||||| Sbjct 965 GTGATAGTCTTTCCAGTTAGTGTCTTCACAAAAATTTGCATG 1006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476346174384600