Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq37552 129 5e-25 seq27769 91.5 1e-13 >seq37552 Length=3269 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35506 ATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATC 35565 ||| || || || | | |||||| | || | ||| |||||| |||||||||||||| Sbjct 3016 ATTACCTCCGCGGAGACGCAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAATC 3075 Query 35566 GGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGA 35625 ||||| ||| || | || ||||| ||||| || || || ||||| |||||||| || | Sbjct 3076 GGCCAGGGTACGTCCATCTTCCAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGG 3135 Query 35626 AGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTC 35685 || | || |||||| ||| ||||| ||||| | | | | || || |||||||| Sbjct 3136 GGGGATGCCCTCCTTATCCTGAATCTTAGCCTTCACATTATCGATGGTATCACTCGATTC 3195 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| ||||| || || || || | ||| || ||||| |||||||| Sbjct 3196 GACATCCAAGGTGATTGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 3246 >seq27769 Length=1647 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 ||| || | ||| ||||| || || || || || ||||||||| ||||| ||||| || Sbjct 550 TCCGCCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTATAATCAGC 609 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 ||| || || |||| || | || ||||| || || || | |||||||| || | || Sbjct 610 CAAAGTACGGCCGTCCTCTAATTGTTTACCTGCGAAGATTAGTCGCTGCTGATCTGGTGG 669 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | || ||||| || || || |||| | | | | || || || || || || Sbjct 670 TATGCCTTCCTTATCTTGTATTTTAACTTTCACATTATCTATAGTATCACTAGACTCGAC 729 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| |||||| || ||||| || | || || || ||||||||||| Sbjct 730 ATCCAACGTGATAGTCTTACCAGTGAGCGTCTTGACGAATATCTGCAT 777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450542930583800