Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq37552 104 2e-17 seq27769 96.9 4e-15 seq44045 91.5 1e-13 seq753 82.4 8e-11 >seq37552 Length=3269 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 || ||||| | ||| |||||||| ||||| || || || ||||| ||||||||||| ||| Sbjct 3017 TTACCTCCGCGGAGACGCAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAATCG 3076 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | | ||| | || || || || || || || || ||||||||||||||||| || Sbjct 3077 GCCAGGGTACGTCCATCTTCCAGTTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGG 3136 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || ||||| || || || ||||| || || || || | || || |||||| Sbjct 3137 GGGATGCCCTCCTTATCCTGAATCTTAGCCTTCACATTATCGATGGTATCACTCGATTCG 3196 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || || || || || | ||| || || || || ||||| Sbjct 3197 ACATCCAAGGTGATTGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCAT 3246 >seq27769 Length=1647 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 || || ||||| || || || || || || || || || ||||| ||| ||| | Sbjct 791 CGTAAAACGAGATGAAGAGTTGACTCTTTCTGTATATTATAGTCAGCAAGTGTGCGGCCA 850 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || |||||||| || ||||| |||| |||||||||||||| || || ||||| || Sbjct 851 TCTTCAAGCTGTTTACCAGCAAAGATCAGTCGCTGCTGATCGGGGGGGATTCCTTCCTTG 910 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 ||||| || || || || || | || || || ||||| ||||| || || Sbjct 911 TCTTGTATCTTGGCCTTCACATTATCAATCGTATCACTGGACTCCACATCGAGGGTGATA 970 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || |||| || || || ||||||||||| || Sbjct 971 GTCTTTCCAGTTAGTGTCTTCACAAAAATTTGCATGTT 1008 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GC 134544 ||| ||||| | || ||| || | ||| | ||||| |||||||| ||||| || || || Sbjct 550 TCCGCCTCTTAATCTCAAAACTAAGTGCAAAGTGGACTCCTTTTGGATGTTATAATCAGC 609 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| | | | ||| || | ||||| ||||| || || | ||||||||||| || | Sbjct 610 CAAAG-TACGGCCGTCCTCTAATTGTTTACCTGCGAAGATTAGTCGCTGCTGATCTGGTG 668 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 |||||||||| || ||||| ||||| ||| || || | || || || || | Sbjct 669 GTATGCCTTCCTTATCTTGTATTTTAACTTTCACATTATCTATAGTATCACTAGACTCGA 728 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | || || || ||||| || | || || ||||| || ||||| Sbjct 729 CATCCAACGTGATAGTCTTACCAGTGAGCGTCTTGACGAATATCTGCAT 777 >seq44045 Length=9771 Score = 91.5 bits (100), Expect = 1e-13 Identities = 543/859 (63%), Gaps = 13/859 (2%) Strand=Plus/Plus Query 7552 GCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATT 7611 || || ||| ||| |||||||| |||| ||| ||||| || || ||||| ||||| Sbjct 1445 GCTGAGCGACCTCAGCACATGCTTATGCGTGTGAGTGTGGGTATCCATGGCGACGACATC 1504 Query 7612 GACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCC 7671 || | || | ||||| ||| | | | || | |||||| |||||||| || Sbjct 1505 GATGGGGCTATTGAAACATACAACAACCTATCACAGGGTTGGTTTACACACGCTTCACCT 1564 Query 7672 ACCATGTTTGCCGCGGGCACAA-ACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCAT 7730 ||| |||| ||| ||||||| ||| || || | || |||||||| | || || || Sbjct 1565 ACCCTGTTCAACGCCGGCACAAGACGTCCC-CAGCTATCATCGTGTTTCCTTCTCACAAT 1623 Query 7731 GCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAA 7790 || ||| ||| || || || |||||||| ||| ||||| | || ||||| Sbjct 1624 CGAGGACGACTCCATTGAAGGTATCTACAACACCCTGAAGACCTGCGCGATGATCTCCAA 1683 Query 7791 ATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGT 7850 | ||| || || || || ||||| || | | | |||| | ||| ||||| Sbjct 1684 GAGTGCCGGAGGTATCGGACTCAACGTTCACAAGATCAGATCCAAAGAAAGCTACATCGC 1743 Query 7851 GTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGT 7910 ||||| ||||| | | ||| | | ||| ||| |||| || ||||| ||| | | Sbjct 1744 TGGAACCAATGGAAACTCTAACGGACTTGTGCCTATGCTGCGTGTATTCAACAACACCGC 1803 Query 7911 GCGACATGTAGACCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCC 7967 || | || ||||| || || || ||| || || ||| || || | ||||| Sbjct 1804 ACGCTACGTTGACCAAGGTGGTAACAAGCGTCCTGGAGCATTTGCAATGTACCTAGAGCC 1863 Query 7968 GTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAG 8027 |||||||| || || | | | || |||| |||| |||| || || | Sbjct 1864 CTGGCACGCAGATATCTTTGAGTTCCTGGATCTAAAGAAGAACACAGGTTCAGAGGAGAT 1923 Query 8028 CAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTC- 8086 || || ||||| |||||||| ||||| | |||||| |||||| || || | Sbjct 1924 GCGCGCACGTGATCTTTTCTTCGGCCTGTGGATCAACGATCTATTTATGGAACG-GTGCG 1982 Query 8087 ATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGC-CCTTTATTAAAAAACGTT 8145 | ||||| | | ||| || | | | || | | ||| || || | | || Sbjct 1983 AAGCCGACGGAGAGTGGAGTCTGTTCT-CACCAAGTGATGCACCAGGCTTGGACGATGTC 2041 Query 8146 TACGGTTCAAAATTTGAACAATTGTACAAACAATACGAACACGACGGC-GCG-TACGTGC 8203 | || | |||||| | | ||| | | ||||| | ||| || | | || | | Sbjct 2042 TGGGGAAAGGAGTTTGAAGATCTATACCACAAGTACGAGCGCGAGGGTAGAGCTAAGCGA 2101 Query 8204 GGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTA 8263 | | | || || | | ||| ||||||| | || || | ||| ||||| | Sbjct 2102 GTAA--TCAAGGCACAGCAGCTGTGGTTCGCCATTCTAGAGGCGCAGACCGAGACCGGCA 2159 Query 8264 TGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCA 8323 || |||||||||||||| || || |||||| ||| || || || || |||||| Sbjct 2160 CACCATACATGCTGTACAAGGATGCGTGCAACCGCAAGAGTAACCAGCAGAATTTGGGCA 2219 Query 8324 CCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGG 8383 |||| ||| ||||||||| ||| || || ||||| | ||||||||||||| Sbjct 2220 CCATCAAGTGCTCTAATCTGTGCTGTGAGATCGTCGAGTACTCTTCCCCCGACGAAGTGG 2279 Query 8384 CCGTTTGCAATCTAGCGTC 8402 | || || ||||| ||||| Sbjct 2280 CTGTGTGTAATCTTGCGTC 2298 >seq753 Length=412 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || ||||| || || ||||| |||| ||||||||||| || || || ||||| || Sbjct 7 TCCTCAAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGATCCGGAGGGATACCTTCCTTA 66 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || ||||| || ||||| || | ||| ||| ||| || || || ||||| Sbjct 67 TCCTGAATCTTCGCCTTGACGTTATCAATTGTATCGCTGCTTTCTACATCAAGCGTAATA 126 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || | ||||||||| || || ||||| Sbjct 127 GTCTTACCAGTAAGAGTTTTAACAAAGATCTGCAT 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505117366902200