Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq37209 93.3 6e-14 >seq37209 Length=3165 Score = 93.3 bits (102), Expect = 6e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 161474 GGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATT 161533 ||||| || |||||||| ||||| || || || || ||||| ||||| || || |||||| Sbjct 2098 GGTATCCTGTTCAACCACGAGTCTCCCCGTCGTGGAGAGACCTTCGTCACGCGCAAGATT 2157 Query 161534 ACTAGGGGACTATCCCGTATTA-GTACAGGACTACAGGATTGTCTATACCTAGGTAATCT 161592 || | | | ||| || | |||| | | |||||| || ||||||||||| || | Sbjct 2158 ACCCGCGCCGTGGCCCAGATCAAGTACGGCAA-ACAGGACTGCCTATACCTAGGAAACAT 2216 Query 161593 AAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTT 161652 || | | || ||||||||||| || ||||| || |||||||||||| ||| | Sbjct 2217 GGACGCCAAGCGTGATTGGGGTCACGCCCGTGACTACGTAGAGGCTATGTGGAGGATTCT 2276 Query 161653 ACA 161655 ||| Sbjct 2277 ACA 2279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729523713521800