Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq44045 134 1e-26 seq753 95.1 1e-14 seq27769 84.2 2e-11 >seq44045 Length=9771 Score = 134 bits (148), Expect = 1e-26 Identities = 179/248 (72%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 131741 AAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTT- 131799 || || || || || || |||||||| || | |||| ||| | ||| || ||||| Sbjct 1887 AACTCAAAGATATCTGCGTGCCAGGGCTCTAGGTACATTGCAAATGCTCCAGGACGCTTG 1828 Query 131800 --ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAA 131857 ||| ||||| | ||| | || | |||||||| |||| |||| ||| ||| | | Sbjct 1827 TTACCACCTTGGTCAACGTAGCGTGCGGTGTTGTTGAATACACGCAGCATAGGCACAAGT 1768 Query 131858 CCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACG 131917 ||||| | |||||||||||| | |||||||| | |||| |||||| ||||||||| Sbjct 1767 CCGTTAGAGTTTCCATTGGTTCCAGCGATGTAGCTTTCTTTGGATCTGATCTTGTGAACG 1708 Query 131918 TTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAG 131977 |||||||| ||||||||| | || ||||| | ||||| | | || ||||| ||| Sbjct 1707 TTGAGTCCGATACCTCCGGCACTCTTGGAGATCATCGCGCAGGTCTTCAGGGTGTTGTAG 1648 Query 131978 ATACCTTC 131985 |||||||| Sbjct 1647 ATACCTTC 1640 >seq753 Length=412 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || |||| || | |||||||| | || || || || |||||||||||||| ||| Sbjct 163 CCACCACGCAGTCGAAGAACCAAATGCAGTGTTGACTCCTTCTGAATATTGTAGTCGGCT 222 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || | || | ||||| | ||| || || || |||| | |||||| ||||| || || Sbjct 223 AGTG-TACGTCCATCTTCCAACTGCTTTCCAGCAAAAATTAAACGCTGCTGATCAGGAGG 281 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| ||||| ||| || |||| | || | ||| || | | |||||| Sbjct 282 GATACCCTCCTTATCCTGGATTTTAGCCTTCACATTATCGATAGTATCGCTAGATTCAAC 341 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | || || || ||||| || |||||||| |||||| Sbjct 342 ATCCAGGGTGATTGTCTTTCCAGTGAGAGTCTTGACAAAGATCTGCATA 390 >seq27769 Length=1647 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| || || || | ||| | || || ||||| || ||||| ||||| | Sbjct 779 CCACCTCGCAAACGTAAAACGAGATGAAGAGTTGACTCTTTCTGTATATTATAGTCAG-C 837 Query 27081 ATGT-TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | || |||| | ||||| ||||||||||| || | || || ||||| ||||| || || Sbjct 838 AAGTGTGCGGCCATCTTCAAGCTGTTTACCAGCAAAGATCAGTCGCTGCTGATCGGGGGG 897 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || || || || |||||| |||| | || | || || ||| || || Sbjct 898 GATTCCTTCCTTGTCTTGTATCTTGGCCTTCACATTATCAATCGTATCACTGGACTCCAC 957 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||| || || || || || |||||||| |||||||| Sbjct 958 ATCGAGGGTGATAGTCTTTCCAGTTAGTGTCTTCACAAAAATTTGCAT 1005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424704017167320