Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sphaeroforma_20sirkka_20[genbank_20GCA_5F001586965.1_202016-03-11] 44,485 sequences; 85,494,527 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq39701 199 6e-46 >seq39701 Length=4095 Score = 199 bits (220), Expect = 6e-46 Identities = 399/585 (68%), Gaps = 21/585 (4%) Strand=Plus/Minus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 ||| ||||| ||||| || || || |||||||| || || || || || || || || || Sbjct 2774 ACAAGCAAAGTCACAGTGGAGTCCCTCATCTCTGCTGATCAACTCATTGGAGAAAGTTAG 2715 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 ||||||||||| |||||||| || | |||||| || | || || || ||||| || || Sbjct 2714 TCCAGGCATTAGCCCACGCTTCTTCATCCAAAAGATCGAGGCAAAGGAGCCAGAGAAAAA 2655 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACT---GGCATCATTATG 46805 || || ||||| || ||||| || || | | ||| ||| |||| |||||| | | Sbjct 2654 GATACCCTCTACTGCAGCGAAGGCTACCACACGCTCACCGAAACTGGAGGCATCGTCGTT 2595 Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 |||||| | | ||||| || ||||||||||| || ||| | ||| || ||||| || Sbjct 2594 GATCCACTTGAGGGCCCAGTCGGCCTTTTTCTTGACGGCAGGGAGTGTCTCAATAGCGTT 2535 Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTAT-TAAAAGACT---AT 46921 ||| || ||| | | |||| | || |||||| | | | ||| | | Sbjct 2534 AAATAG---GTTATCCTTCTCAC-GGGGGTCACGGATGTATGTCTCGATAAGCGTGGAGT 2479 Query 46922 ACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAG 46981 |||| || || || ||||| ||||| || ||||| |||||||| || || | ||| || | Sbjct 2478 ACATCTCAGAGTGGATGTTCTCAATGGCGATCTGGAATCCGTAGAAGCAACGTGCCTCGG 2419 Query 46982 TAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAG 47041 || ||||| || | || || || | |||||| ||||| || |||||||| | Sbjct 2418 CGATTTGTACTTCACCGCTGAAGCGCTCGAGGAGATTCTCGTTCACAATACCATCACTGG 2359 Query 47042 CAGCAAAAAATGCCAATACATGTTTAATAAAATAT-----TTTTCATCGGTAGTCAGTTT 47096 |||| || || ||||| ||||| |||| | | | |||| || || || Sbjct 2358 CAGCGAAGAAAGCCAACACATG--GGATAAGAAGTGGCGCTCGCCATCCTTA---AGGTT 2304 Query 47097 ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTC 47156 | ||||||| | ||| || | ||| || || ||| | |||||||| || ||||| Sbjct 2303 CTCCCAGTCAGCTAGATCACGAGACAGATCAACCTCCTCAACAGTCCAGAAAGAAGCCTC 2244 Query 47157 TGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAA 47201 || || || ||||| | ||| || || | |||||||| || || Sbjct 2243 CGCCTTCTTGTACATCTGCCAGATCTCCTGGTATTGGATAGGGAA 2199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712537963915200